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scnpilot_p_inoc_scaffold_6721_3

Organism: SCNpilot_P_inoc_Acidovorax_68_4_fragment

partial RP 24 / 55 BSCG 24 / 51 MC: 1 ASCG 5 / 38
Location: 1414..3423

Top 3 Functional Annotations

Value Algorithm Source
sigma-54 factor interaction domain-containing protein id=5080040 bin=GWF1_Burkholderiales_GWF1_66_17 species=Alicycliphilus denitrificans genus=Alicycliphilus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD similarity UNIREF
DB: UNIREF100
  • Identity: 74.9
  • Coverage: 676.0
  • Bit_score: 976
  • Evalue 1.20e-281
  • rbh
sigma-54 factor interaction domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 70.3
  • Coverage: 674.0
  • Bit_score: 914
  • Evalue 1.60e-263
Tax=BJP_08E140C01_Burkholderiales_65_30 similarity UNIPROT
DB: UniProtKB
  • Identity: 75.3
  • Coverage: 673.0
  • Bit_score: 980
  • Evalue 9.30e-283

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Taxonomy

BJP_08E140C01_Burkholderiales_65_30 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2010
ATGGCGGCGCCCCGCGCACCCGGTACGCAGCTCCAGGGCCCTCCCCAGGCCCCGGAGGGCCCGGAAGACGCGCTCATCCGCCAGGCGCACCGCCGCTCGGCCGCCTTCGGCCTGCTGGAGCGCGATGCGCCCGATTTTTCCAGCGCGCTGCGGGGCGACCTGCGCAGCGCGCTCGACGAGAACCGCTTTCTCTTCCAGCACGCGGCGCCGGTGATGGAGACGCTCTACGGCCAGATCGTCAACACCCACAGCATGGTGCTGCTGACCTCGGCGCGCGGCATGGTGCTGCACACCCTGGGCGACGCCGATTTCCTGGAGAAGGCCTCGCGCGTCGCCCTGACCCCGGGCATGGACTGGTCGGAGCGCAGCAAGGGCACGAACGCCATCGGCACCGCCCTGTCGGAGCAGGAAGCGCTCACCGTGCACGGCAGCCAGCACTACATGGACGCGAACAAGATCCTCACCTGCTCGTGCGCCCCCATCTTCGACCCCTACGGCCAGGTGATCGGTGCGCTCGACGTGACGGGGGACCAGCGCAGCATCCACCAGCACACCCTGGCGCTGGTGCGCATGTCGGCGCAGATGATCGAGAACCACATGTTCGCCGACATCTTTCCCAAGGCGATCCGCATCCATTTCCACACGCGCCCGGAATTCCTCGGCACCCTGGTCGAAGGCATCGCCGTGTTCTCGCCCGAGGGGCGCTTCATTTCCGCCAACCGCAGCGCGCAGTTCCAGATCGGCCTGCCGTTCGCGGCCCTGCAGGCGCACACCTTCCCCTCGCTGTTCGGCATTCCGCTCTCCGCGCTGTTCGAGTTGTTCGGCGGCACCGAGCCCGCGCCGCGCCAGCTGGTGCTGCACAACGGCGTGGCGGCCTGGTGCCGCGCGGCGTTCCAGGCCGCCGCGCCGTGGTCGGCCGCCCCGCAGCCGGCCGCGCGGGCGTCGGCTGCCGCGCCGGTGGCGCGGCGGGCGCACATGTCGTCCCTGCAGTACCTCGACACGGGCGACGCGCAGGTGGCCGCCGTCATCGACAAGCTGCGCCGCGTGCAGGGCAAGGACATCCCCATCCTGCTGCTGGGCGAGACGGGCACCGGCAAGGACCTGCTCGCCCAGGCGATCCACGGCGATTCGCCGCGTGCCGGGCAGGCCTTTGTTTCGGTGAACTGCGCCTCCATCCCCGAAACGCTGATCGAATCCGAGCTCTTCGGCTACGAGGAGGGCGCCTTCACCGGCGCGCGCAAGAAGGGCGCGACCGGCAAGATCCTGCAGGCCCACGGCGGCACGCTGTTCCTCGACGAGATCGGCGACATGCCGGCCCACCTGCAGGCCCGGCTGCTGCGCGTGCTGCAGGAGCGCAAGGTCAGCCCGCTCGGCGCGGGCCGGGAGGTGGACGTGGACATCGCCGTGGTCTGCGCCACGCACAAGAACCTCAAGGACCTGATGGCGCGCGGCGACTTCCGCGAAGACCTCTACTACCGCTTGAACGGCCTGGTGCTGCGCCTGCCGGCGCTGCGCGAGCGCAGCGATTTCGAGCCGGTGGCGGGCCGCATCCTGAAGCTCCTCGCCGGGGACGGCCCGGCCCAGGCGCTCGCGCCCGAGGTCATGGAGGTGTTCCGGCGCTACCACTGGCCGGGCAACCTGCGCCAGCTGCACAACCTGCTGCGCACCGCGGCCGCCATGGCCGGCACGGGCGGCCGCATCGAACTGGCGCACCTGCCGGACGATTTCCTGGAGGAGCTCCAGCTCGCCCCGCCCAGCCACCCGCTGCCCATGCCGCCGGGTGCGCGCGACCTGCCGCCGCTCGTCACGCTGCCGACCACGCCGGCCGAGATGGCCGCCGCCGGCCAGGCCGAAGTCCAGAGCCTGCAGGAGGTGACGCTGGGCGCCATGGCGCAGATGCTGCGGCTGCACAAGGGCAATGTGTCGGCGGCAGCCAAGGCGCTGGGCGTGTCGCGCAACACCATCTACCGCAAGAAGGACCTGCTCCCGCCCGACGTGCTGCGCGGCTGA
PROTEIN sequence
Length: 670
MAAPRAPGTQLQGPPQAPEGPEDALIRQAHRRSAAFGLLERDAPDFSSALRGDLRSALDENRFLFQHAAPVMETLYGQIVNTHSMVLLTSARGMVLHTLGDADFLEKASRVALTPGMDWSERSKGTNAIGTALSEQEALTVHGSQHYMDANKILTCSCAPIFDPYGQVIGALDVTGDQRSIHQHTLALVRMSAQMIENHMFADIFPKAIRIHFHTRPEFLGTLVEGIAVFSPEGRFISANRSAQFQIGLPFAALQAHTFPSLFGIPLSALFELFGGTEPAPRQLVLHNGVAAWCRAAFQAAAPWSAAPQPAARASAAAPVARRAHMSSLQYLDTGDAQVAAVIDKLRRVQGKDIPILLLGETGTGKDLLAQAIHGDSPRAGQAFVSVNCASIPETLIESELFGYEEGAFTGARKKGATGKILQAHGGTLFLDEIGDMPAHLQARLLRVLQERKVSPLGAGREVDVDIAVVCATHKNLKDLMARGDFREDLYYRLNGLVLRLPALRERSDFEPVAGRILKLLAGDGPAQALAPEVMEVFRRYHWPGNLRQLHNLLRTAAAMAGTGGRIELAHLPDDFLEELQLAPPSHPLPMPPGARDLPPLVTLPTTPAEMAAAGQAEVQSLQEVTLGAMAQMLRLHKGNVSAAAKALGVSRNTIYRKKDLLPPDVLRG*