ggKbase home page

scnpilot_p_inoc_scaffold_9196_2

Organism: SCNpilot_P_inoc_Acidovorax_68_4_fragment

partial RP 24 / 55 BSCG 24 / 51 MC: 1 ASCG 5 / 38
Location: comp(1791..4127)

Top 3 Functional Annotations

Value Algorithm Source
penicillin-binding protein 1c (EC:2.4.1.129) similarity KEGG
DB: KEGG
  • Identity: 71.3
  • Coverage: 750.0
  • Bit_score: 1023
  • Evalue 2.90e-296
Penicillin-binding protein 1C n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TZB2_ALIDB similarity UNIREF
DB: UNIREF100
  • Identity: 71.3
  • Coverage: 750.0
  • Bit_score: 1023
  • Evalue 1.00e-295
penicillin-binding protein 1C Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 71.3
  • Coverage: 766.0
  • Bit_score: 1032
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Burkholderiales_65_40 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2337
ATGCAGAGCCACGCAGATTGCGCCGTCCGGCGCCTGCTACAAAGCGGCGTGGCTTTTCTTCGCTGCCTGCTCGTTCTGCGTGCGCGCGCTCCGGCCGCCGCCTTGGTGCTTGCGGTCGGCATGCCGGCGGCCTGGGCGCTGCCCACGTTCGACGACGTGCGGCGCGGGTACCGCCCGTCGGAAACGCTGGTGCTGTCGCGCGAGGGGGAAGTGCTGCAGCGCGTGCGCACCGACGCGAGCGTGCGCCGGGGTGCGTGGACCACGCTGGCCGAGATTTCCCCGGCGCTGCAAAGCGCCATGCTCCTGTCCGAGGACAAGCGCTTCTACGCGCACAGCGGCGTCGACTGGCAGGCCGCCACGGCCGCCGCCTGGGCCAACCTGTGGAACGAGCGCACGCGTGGCGCCAGCACCATCACCATGCAGCTCGCCGGACTGGTCGATGCGCCCGGCGGCGCCGACCTGCGCCAGCGTCCCGGCGGGCGCAGCGTGGTGCAAAAGCTCGGCCAGGTGGCGGCGGCCGAAGTGCTGGACCGGCGCTGGCGCAAGGACCAGATCCTGGAGGCCTACCTCAACCTGGTGCCGTTTCGCGGCGAGCTCGTCGGCATCGACGCGCTCAGCCGCACGCTGTTCGGCAAGGCGCCGCATGGGTTGGACGAGCGCGAGGCGGCGCTGGCCGCGGCGCTGGTGCGCGCGCCCAACGCCGGCGCCGCGCAGGTGGCGCGCCGCGCCTGCGGCGTGCTGCAGGACATGCAGCAGGCCGGTCGCAGCGCGGCCGCACCGCAGACTAGCGATTGCGACGCGCTGGCGCTGCTGGCGGCAAGCGCCCTGGGTCGGCGCGCCTTTCCCGCCAGCGAGGGCGTCGCCCCGCATTTCGCGCGCCGCGCGCTGGCGGCCCTGCCCACCGGAAGAGCGCCCCCCGCGCACATCCGCACCACGCTCAGCGCGCCCGTGCAGCGCTTTGCCGTGCAGACACTGGCGCAGCAACTGCGCGAGCTGGCCGGCCGCAACGTGCAGGACGGCGCCATCGTCGTGCTGGACAACGCCAGCGGCGAGGTGCTCGCCTGGGTCGGCTCCTCGGGCGAACTCAGCCAGGCGACCGAGGTCGACGGCGTGCTGGCGCGGCGCCAGCCGGGCTCGACCCTCAAGCCCTTCCTGTATGCGCAGGCCCTGCAGGAGCGGCGGCTGACGGCGGCCTCCCTGATCGACGATTCGCCGGCGCACATCGCCACCGCCGGCGGCCTGTACATCCCGCAGAACTACGACCTGCGCTTCAAGGGCTGGGTGTCGGTGCGCACGGCGCTCGCGTCCTCGCTCAACGTGCCGGCGGTGCGCACGCTGGCCATGGTCTCGCCCGACGCCTTCTTCCAGCGCCTGCAGGCGCTCGGCCTCGCACTGCGCGAGAGCGGCGGCTACTACGGCCTGGGGCTGGCCCTGGGCAGCAGCGAAGTCACGCTGCTGCAACTGGCCAACGCCTACCGCGCGCTGGCCAACGGCGGGCGCGCCAGCGCCGTGGCGCCGCCGCTGGCCGGCGCCAGGCCGGCGCCGCAGGGCGCGCGCGTGCTGGATGCCGGCGCCACCTTCATCGTCGGCGACATCCTCGCCGACGCGAATGCGCGCGCGATGACCTTCGGCCTCGACAGCGTGCTGGCGACGCGCTTCTGGAGCGCCGTGAAGACCGGCACCAGCAAGGACATGCGCGACAACTGGGCACTCGGCTGGTCCGAGCGCTACACGGTGGGTGTGTGGGTCGGCAATGCGGCCGGGGGCGCCATGCACGAGGTCAGCGGCGCGAGCGGCGCCGCACCCATCTGGGCGGCCGTGATGGGCCACCTGCATGCGCACACGCCCAGCCGGGCGCCGAACGCGCCGCGCGGCGTGCGCGTCCAGGCGGTGCGCTTTGGTCCCGGTGCGGGCGGCGGGCCGCTGGAGGCGGCGCGCAGCGAGTGGTTCCTGAACGGCACGCAACAGGCGTTGTTTGCTATCGATAAGGAAGCTATAAGCCTTTATACAGCAAGCGCTGGAGGCCAAAAAGACCAGAAAAATCCGCCCCTGGACGGCGTCCCTGCCTGGCGCATCGCCGAGCCGGCGCCCGGCGCCATCGTCGCGCTCGACCCGGACATCCCGCCCGCGCGCCAGCGCCTGCGCTTCGTCGCCTCCGGCGCGCCCGGCGCGGGCAGCGTGGTCTGGGTGCTCGACGGCAAGCGCGTGGCCGGCGGCGCCACGCACGCCTGGCCGCCCTGGCCGGGCCGGCACCGGCTGCAGCTGCGCGACGCGCGCGGGCGCGTGCTCGACGAAGTGCCGTTCGAGGTGCGCGGCGCCGGTGTGGCGCGGCGCTGA
PROTEIN sequence
Length: 779
MQSHADCAVRRLLQSGVAFLRCLLVLRARAPAAALVLAVGMPAAWALPTFDDVRRGYRPSETLVLSREGEVLQRVRTDASVRRGAWTTLAEISPALQSAMLLSEDKRFYAHSGVDWQAATAAAWANLWNERTRGASTITMQLAGLVDAPGGADLRQRPGGRSVVQKLGQVAAAEVLDRRWRKDQILEAYLNLVPFRGELVGIDALSRTLFGKAPHGLDEREAALAAALVRAPNAGAAQVARRACGVLQDMQQAGRSAAAPQTSDCDALALLAASALGRRAFPASEGVAPHFARRALAALPTGRAPPAHIRTTLSAPVQRFAVQTLAQQLRELAGRNVQDGAIVVLDNASGEVLAWVGSSGELSQATEVDGVLARRQPGSTLKPFLYAQALQERRLTAASLIDDSPAHIATAGGLYIPQNYDLRFKGWVSVRTALASSLNVPAVRTLAMVSPDAFFQRLQALGLALRESGGYYGLGLALGSSEVTLLQLANAYRALANGGRASAVAPPLAGARPAPQGARVLDAGATFIVGDILADANARAMTFGLDSVLATRFWSAVKTGTSKDMRDNWALGWSERYTVGVWVGNAAGGAMHEVSGASGAAPIWAAVMGHLHAHTPSRAPNAPRGVRVQAVRFGPGAGGGPLEAARSEWFLNGTQQALFAIDKEAISLYTASAGGQKDQKNPPLDGVPAWRIAEPAPGAIVALDPDIPPARQRLRFVASGAPGAGSVVWVLDGKRVAGGATHAWPPWPGRHRLQLRDARGRVLDEVPFEVRGAGVARR*