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scnpilot_p_inoc_scaffold_11166_3

Organism: SCNpilot_P_inoc_Acidovorax_68_4_fragment

partial RP 24 / 55 BSCG 24 / 51 MC: 1 ASCG 5 / 38
Location: comp(1953..2624)

Top 3 Functional Annotations

Value Algorithm Source
TetR family transcriptional regulator; K03577 TetR/AcrR family transcriptional regulator, acrAB operon repressor Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 59.7
  • Coverage: 206.0
  • Bit_score: 225
  • Evalue 5.80e-56
acrR; transcriptional regulator AcrR; K03577 TetR/AcrR family transcriptional regulator, acrAB operon repressor id=12551458 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 58.9
  • Coverage: 202.0
  • Bit_score: 220
  • Evalue 1.30e-54
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 54.4
  • Coverage: 204.0
  • Bit_score: 195
  • Evalue 1.30e-47

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Taxonomy

RLO_Burkholderiales_65_40 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 672
ATGTGCGCATGGCTTTTTCTCCCCACCATGGCCCGGCGCACCAAGGCTGACGCGCAGATCACGCGCGCTGCGCTGCTCGACGCGGCCGAGTTGCTGTTCGACGAACGTGGGGTCTCGCGCACCTCGCTGGCCGACATTGCCCAGGCCGCAGGCACCACGCGCGGCGCCATCTACTGGCACTTCGCCGACAAGGCCGCCCTGTTCGACGCCATGGTCGAACGCGCCACGGCGGCGCTCGCCTCCGACCGGCCCGGCGACCAGGCCGCGATCGACCTCAGGCAGTTGTGCCTGGGCCTGGTGAGCGCGCTCGAAGGCATTGCACGCCACCCGCATCTGCGCCGGGTGATGCGCATCGCCATCCACCGGGTCGAGTACGTCGGCGAGCTGGACGCATTGCGCGCGCGCCACCTGTCGGCGCACCGCGCGTGGACGGCGCGCAGCGAGCGCGTGCTGGCACAGGCCCTGGCGGCCGGGCCGCACCCCGCGCCCATGGACAGTGCGCTCGCTGCCCGAGGGCTCCAGGCGCTCATCGAAGGGCTGCTGCACAGCTGGCTGCTCGACCCGGACGCGTTCGACCTGCCCGACGCCGGGCGCGCGGCGGTCGCCAACTGGCTACGGGGCCTGGGGCTGGACGACGGTGCCTGCGCCGCGCCGCAAAGCCCCAACGGTTGA
PROTEIN sequence
Length: 224
MCAWLFLPTMARRTKADAQITRAALLDAAELLFDERGVSRTSLADIAQAAGTTRGAIYWHFADKAALFDAMVERATAALASDRPGDQAAIDLRQLCLGLVSALEGIARHPHLRRVMRIAIHRVEYVGELDALRARHLSAHRAWTARSERVLAQALAAGPHPAPMDSALAARGLQALIEGLLHSWLLDPDAFDLPDAGRAAVANWLRGLGLDDGACAAPQSPNG*