ggKbase home page

scnpilot_p_inoc_scaffold_11166_4

Organism: SCNpilot_P_inoc_Acidovorax_68_4_fragment

partial RP 24 / 55 BSCG 24 / 51 MC: 1 ASCG 5 / 38
Location: 2793..4046

Top 3 Functional Annotations

Value Algorithm Source
Secretion protein HlyD n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12BX7_POLSJ similarity UNIREF
DB: UNIREF100
  • Identity: 70.9
  • Coverage: 409.0
  • Bit_score: 544
  • Evalue 1.30e-151
  • rbh
RND family efflux transporter mfp subunit; K03585 membrane fusion protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 71.1
  • Coverage: 415.0
  • Bit_score: 565
  • Evalue 5.80e-158
secretion protein HlyD similarity KEGG
DB: KEGG
  • Identity: 70.9
  • Coverage: 409.0
  • Bit_score: 544
  • Evalue 3.60e-152

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Burkholderiales_65_40 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1254
ATGGCTCCCGTGTGGGCCCCGGCTTTGCCCCGTTCCCTCGCCGTCGCGGCGGCTGGCGCCGTGCTGGCCCTGGCGGCCTGCAGCAAGACAGAGGCCCCGAAGGGCGCGCCGGGCGGTGGCATGCCGCCGCCGCAGGTCGGTGTGGTCACGGTGGAGCCGGGCAATGTCGGCCTGTTGAGCGAACTGCCCGGCCGCCTCGAAGCCTCGCGCGTGGCGCAGGTGCGCGCCCGCGTCGCGGGCATCGTGCAGGAGCGGCTGTTCCGCGAAGGCAGCGACGTCAAGGCCGGCCAGCCCTTGTTTCGCATCGATGCGGCGCCCTACGCCGCCGCCGTGCAGAGCGCTCAGGCCGCGCTGGCGCGCGCCGAGGCCAGCCTGTCGCAGAGCAGCGCGCTGGCGCGGCGCTACAAGCCGCTGCTGGAGGCCAACGCCGTGAGCGAGCAGGAATACGCCAACGCCGTGGCCGCGCAGCAGGCCGGCGCTGCCGATGTGGCGGCCGCCAAGGCGGCCATCGCCACCGCGCAGATCAACCTGAACTACGCCAGCGTGACGGCGCCGATCTCGGGCCGCATCGGGCGCGCGCTCGTGACCGAAGGCGCGCTCGTCGGTCAGGGCGAAGCAACGCCGCTCGCGGTCATCCAGCAGATCGATCCGCTGTACGTCAACTTCACGCAGTCGGCCGCGCAGGTCATGGAACTGCGCCGCGCCATGGAGCAGGGGCGCCTGCAGCGTGCCGGCAAGGCGGACGCCGCCAGCGTGCGCCTGGTGCTGGAAGACGGCAGCGAATACCCCGAACCAGCGCGGCTGCTGTTTTCCGACCTGACGGTGGACGCTGGCACCGGGCAGATCACCTTGCGCGCCGAGGTGCCCAACCGTGGCATGCGCCTGCTGCCCGGCCTGTACGTGCGCGTGCGCATCGAGCAGGCGCAGGCGAGCAACGCGGTGCTCCTGCCGCAGCAGGCGGTGACGCGCTCGGCCGGCGGCGACAGCGTGCTTGTGGTGGGCGCGGACAACAAGCCGATCCCGCGCACCATCAAGCTCGGAGGCCAGCAGAACGGCCATTGGGTGGTGCTCGAAGGCCTCCAGAAGGGCGAGCAGGTGGTGGTCGACGGCTTCCAGAAGCTGCGCGGCGGCGCGCCGGTGCAAACGGTACCCTGGACGCCGCCCGGCGCTCCCGCCCCAGCGGCGGCCGGCCCGGCGAGCGCCGCCAGCGGCGCCCAGGCGCCGGCGTCTTCGGCCAGTTCGGCAGCGCGCTAA
PROTEIN sequence
Length: 418
MAPVWAPALPRSLAVAAAGAVLALAACSKTEAPKGAPGGGMPPPQVGVVTVEPGNVGLLSELPGRLEASRVAQVRARVAGIVQERLFREGSDVKAGQPLFRIDAAPYAAAVQSAQAALARAEASLSQSSALARRYKPLLEANAVSEQEYANAVAAQQAGAADVAAAKAAIATAQINLNYASVTAPISGRIGRALVTEGALVGQGEATPLAVIQQIDPLYVNFTQSAAQVMELRRAMEQGRLQRAGKADAASVRLVLEDGSEYPEPARLLFSDLTVDAGTGQITLRAEVPNRGMRLLPGLYVRVRIEQAQASNAVLLPQQAVTRSAGGDSVLVVGADNKPIPRTIKLGGQQNGHWVVLEGLQKGEQVVVDGFQKLRGGAPVQTVPWTPPGAPAPAAAGPASAASGAQAPASSASSAAR*