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scnpilot_p_inoc_scaffold_94_149

Organism: SCNpilot_P_inoc_Burkholderiales_62_9

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: 155922..156851

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Variovorax paradoxus RepID=UPI000370FB2E similarity UNIREF
DB: UNIREF100
  • Identity: 76.0
  • Coverage: 308.0
  • Bit_score: 452
  • Evalue 3.80e-124
  • rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:EFI59382.1}; TaxID=563045 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas similarity UNIPROT
DB: UniProtKB
  • Identity: 69.9
  • Coverage: 306.0
  • Bit_score: 417
  • Evalue 1.40e-113
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 62.3
  • Coverage: 308.0
  • Bit_score: 377
  • Evalue 4.40e-102

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Taxonomy

Comamonas testosteroni → Comamonas → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 930
ATGGACCTGAGGCAACTCCGGTATTTCGTGGTGCTGGCCACGCAACAGCACTACGGCCGGGCGTCCAGCATCCTGCATGTGGCGCAGCCGGCGCTCAGCCGCCAGATCAAGCTGCTGGAAGACGAGCTGGGGGTGCAATTGTTCGAGCGCCACCCGCGCGGGGCGGCGCCCACCGCCGAGGCGCTGTTCCTGCTGGAACGCGCCTCCTTCCTGCTGCGCTACGCCGAACAGGTCAAGCAGGACCTGATCGCGCGCCAGCGCGACCCGCGCGGGCCGGTGGCGATCGGCCTGTCGCCCGCGCTCGCCCTGCTGCTGGCGGCGCCGCTCACGCAGGCCATGCGGGCCCGCTATCCGGACGTGCGGCTGCGCATCATCGAAGGGTTTTCGCAGTCGCTGCACGACATGCTGGGCCAGGGCTCGGTGGACGTCGCGATCCTGAACGGCCCCATGCAGCTCGCCAACCTGCATGTCACGCCGCTGATGACCGAGGCGCTATGCCTGATCGGGCCGGCCGGCGATGCGCGCCTGCGCGGCCAGGCCCTGCCGCTCCAGCGCCTGGACGGCGTGCCGCTGGTGATGACGGGCGTCCCCAAGTCGGGGGTCCGCCTGGAACTGGAAGCCGCGGCCGCGCACGCGGGCGTCGAGCTGGAAAGCGTGGTGGAAGTGGAAACCATCACGGTCGCCTCGCGGCTGGTCCGCGAAGGCCTGGGCATGACCGTGCACTTCGCCGCCGTGGTGAAGGCCGAGATCGATGCGGGTCAGCTGGCCGCGGTCCCGATCGAAGGATTGCGGTTGCGCCGCATCCTGGCCCGCGCGGCGGACCGTCCGCCGTCGCGCGCCACGGAGGTCTTGATCGACTGCCTGCAGCAGGTCATCGGCGAGCAAGTGCGGGCGGGGGACTGGCCCCACGCCCGGCTGGAGTTCCAGTAA
PROTEIN sequence
Length: 310
MDLRQLRYFVVLATQQHYGRASSILHVAQPALSRQIKLLEDELGVQLFERHPRGAAPTAEALFLLERASFLLRYAEQVKQDLIARQRDPRGPVAIGLSPALALLLAAPLTQAMRARYPDVRLRIIEGFSQSLHDMLGQGSVDVAILNGPMQLANLHVTPLMTEALCLIGPAGDARLRGQALPLQRLDGVPLVMTGVPKSGVRLELEAAAAHAGVELESVVEVETITVASRLVREGLGMTVHFAAVVKAEIDAGQLAAVPIEGLRLRRILARAADRPPSRATEVLIDCLQQVIGEQVRAGDWPHARLEFQ*