ggKbase home page

scnpilot_p_inoc_scaffold_128_8

Organism: SCNpilot_P_inoc_Burkholderiales_62_9

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: comp(9356..9733)

Top 3 Functional Annotations

Value Algorithm Source
RNA-binding S4 protein; K04762 ribosome-associated heat shock protein Hsp15 id=12497780 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 55.7
  • Coverage: 122.0
  • Bit_score: 146
  • Evalue 1.80e-32
hslR; heat shock protein; K04762 ribosome-associated heat shock protein Hsp15 Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 55.8
  • Coverage: 120.0
  • Bit_score: 146
  • Evalue 3.30e-32
RNA-binding S4 domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 58.2
  • Coverage: 122.0
  • Bit_score: 138
  • Evalue 1.10e-30

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Betaproteobacteria_64_14 → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 378
ATGGAAGAACTACGTATCGATAAATGGCTGTGGGCGGCGCGGTTCTACAAGACCCGCACGCTGGCCCAGGAGGCGGTCGAGGCCGGGCAGGTGAAAGTGTCCGGCGAACGGGTCAAGCCCTCGCGCGCCGTGCGCCCCGGCGACATCCTGCTGATCCGCGCCGGAGAACAGGATTGGGAGGTCCTGGTCCGCGCCCTGTCCACCCAGCGCGGCCCCGCCGTTTTCGCGCGCACCCTGTACGACGAAACCCAGCAAGGCCTCAAACGCCGCCTGGAAGCCATCGAACTACGCCGCCAGAACGCCGACCCCGCCGCCAGCCTGAAAGGCCGCCCCACCAAGCAAGACCGCCGCAAGATCGAAAAGTGGCTCCCCAATTGA
PROTEIN sequence
Length: 126
MEELRIDKWLWAARFYKTRTLAQEAVEAGQVKVSGERVKPSRAVRPGDILLIRAGEQDWEVLVRALSTQRGPAVFARTLYDETQQGLKRRLEAIELRRQNADPAASLKGRPTKQDRRKIEKWLPN*