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scnpilot_p_inoc_scaffold_128_35

Organism: SCNpilot_P_inoc_Burkholderiales_62_9

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: comp(34284..35006)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor FliA n=1 Tax=Limnobacter sp. MED105 RepID=A6GSX0_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 62.4
  • Coverage: 237.0
  • Bit_score: 308
  • Evalue 5.20e-81
  • rbh
RNA polymerase sigma-28 subunit FliA/WhiG similarity KEGG
DB: KEGG
  • Identity: 60.7
  • Coverage: 239.0
  • Bit_score: 309
  • Evalue 1.10e-81
RNA polymerase sigma factor FliA {ECO:0000256|HAMAP-Rule:MF_00962}; RNA polymerase sigma factor for flagellar operon {ECO:0000256|HAMAP-Rule:MF_00962}; Sigma F {ECO:0000256|HAMAP-Rule:MF_00962}; Sigma similarity UNIPROT
DB: UniProtKB
  • Identity: 60.7
  • Coverage: 239.0
  • Bit_score: 309
  • Evalue 5.60e-81

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Taxonomy

Burkholderiales bacterium GJ-E10 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 723
ATGTATACGCGTGAAGGAACCCTGGCGCGCGAGTCGAACGTCGAACAGTACGTGCCCATGGTGCGCCGCATGGCCCATCACATGGTGGCGCGGCTGCCCGCCAGCGTACAGATCGAGGACCTGATCCAGGCCGGCATGCTGGGCCTGCTGGATGCGCTCGGCCGCTTCGAGGAAGGACTGGGCGCGCAGTTCGAGACCTACGCCACCCAGCGCATACGCGGCGCGATGCTGGATGAACTGCGCCGGGGTGACTGGCTGCCGCGCAGCGTTCGGCAGGTCCAGCGCAAGATCGAGGCGGCCATGCATCGCAGCGAGCAGAAGCTGGGCCGCTCGCCCACCGACACCGAGATGGCGGCCGAACTCGAGGTGGAGCTGGGCGAATACCAGCAGATGCTGGCCGATGCCCGGGGCGTGCAGCTGTTCCATTACGAAGACCTGGACAGCGGCGAGGACACCGATGACTACCTGGACCGGCACATGCCGGCCGACGGCGCGGGCGACCCTCAGGCCAGGCTGTCGGACCGCCGTTTCCGCGAAGCCGTGGTCCACGGCATCGAGCGCCTGCCCGAGCGAGAGAAGCTGGTAATGGGTATGTACTACGAGCAGGACATGAACTTCAAGGAGATCGCCGCGGTGCTGGGCGTGACCGAATCGCGGATCTGCCAGCTGCATTCGCAGGCGGTGTCGCGTCTGCGAACACGCCTGAAGGAGTGGGGGCGCTAG
PROTEIN sequence
Length: 241
MYTREGTLARESNVEQYVPMVRRMAHHMVARLPASVQIEDLIQAGMLGLLDALGRFEEGLGAQFETYATQRIRGAMLDELRRGDWLPRSVRQVQRKIEAAMHRSEQKLGRSPTDTEMAAELEVELGEYQQMLADARGVQLFHYEDLDSGEDTDDYLDRHMPADGAGDPQARLSDRRFREAVVHGIERLPEREKLVMGMYYEQDMNFKEIAAVLGVTESRICQLHSQAVSRLRTRLKEWGR*