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scnpilot_p_inoc_scaffold_271_26

Organism: SCNpilot_P_inoc_Burkholderiales_62_9

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: 18498..19031

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L6 n=1 Tax=Bordetella avium (strain 197N) RepID=RL6_BORA1 similarity UNIREF
DB: UNIREF100
  • Identity: 84.2
  • Coverage: 177.0
  • Bit_score: 305
  • Evalue 4.30e-80
  • rbh
rplF; 50S ribosomal protein L6 similarity KEGG
DB: KEGG
  • Identity: 84.2
  • Coverage: 177.0
  • Bit_score: 305
  • Evalue 1.20e-80
50S ribosomal protein L6 {ECO:0000255|HAMAP-Rule:MF_01365}; TaxID=360910 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella avium similarity UNIPROT
DB: UniProtKB
  • Identity: 84.2
  • Coverage: 177.0
  • Bit_score: 305
  • Evalue 6.00e-80

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Taxonomy

Bordetella avium → Bordetella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 534
ATGTCGCGTATAGCTAAGTATCCCGTCGAGCTGCCCAAGGGCGTCGAAGCAACGATCGCTGCTGACCAGATCACCGTCAAGGGCCCCCTGGGCACGCTGATCCAGGCCCTGACCGGCCAGGTCACGATCGCGCAAGACGCCGGCAAGCTGACTTTCGTCGCCGCCAACGACAGCCGCGAAGCCAAGGCCATGTCCGGTACCGTCCGGGCCCTGGTCAACAACATGGTGACCGGTGTGAGCAAGGGCTTCGAGCGCAAGCTGACCCTGGTCGGCGTGGGCTATCGTGCCCAGGCGCAAGGCGATGCCGTCAAGCTGCAGCTCGGTTTCTCGCACGATGTCGTGCATCAGATGCCTGCCGGCGTGAAGGTTGAGTGCCCCTCGCAGACGGAGGTGATCGTCAAGGGCGCCAACAAGCAGCAGGTTGGTCAGGTGGCCGCTGAAATCCGCGCCTACCGCTCTCCCGAACCCTACAAGGGCAAGGGCGTGCGCTATGCGGACGAGCGGGTCATCATCAAAGAGACCAAGAAGAAATAA
PROTEIN sequence
Length: 178
MSRIAKYPVELPKGVEATIAADQITVKGPLGTLIQALTGQVTIAQDAGKLTFVAANDSREAKAMSGTVRALVNNMVTGVSKGFERKLTLVGVGYRAQAQGDAVKLQLGFSHDVVHQMPAGVKVECPSQTEVIVKGANKQQVGQVAAEIRAYRSPEPYKGKGVRYADERVIIKETKKK*