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scnpilot_p_inoc_scaffold_271_108

Organism: SCNpilot_P_inoc_Burkholderiales_62_9

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: comp(105624..106313)

Top 3 Functional Annotations

Value Algorithm Source
GntR family transcriptional regulator n=1 Tax=Rhodococcus opacus RepID=UPI00029CCBB0 similarity UNIREF
DB: UNIREF100
  • Identity: 33.5
  • Coverage: 206.0
  • Bit_score: 120
  • Evalue 1.90e-24
Transcriptional regulator {ECO:0000313|EMBL:AKH68096.1}; TaxID=1620392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Spongiibacter.;" source="Spongiibacter similarity UNIPROT
DB: UniProtKB
  • Identity: 32.9
  • Coverage: 234.0
  • Bit_score: 132
  • Evalue 9.00e-28
HTH-type transcriptional repressor CsiR similarity KEGG
DB: KEGG
  • Identity: 33.5
  • Coverage: 206.0
  • Bit_score: 120
  • Evalue 5.50e-25

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Taxonomy

Spongiibacter sp. IMCC21906 → Spongiibacter → Alteromonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 690
ATGTCGAGCCCCCTGCCCCATCCCTCCGCCTTCCCGCCCAACGGCGCCGACCTCGGCGCGCCCGCGGGCAAGACGGGCAGGATCCTGCAGATCCTGCAGGCGCGCTTCGCCAGCGGGCACTACCGCTTCGGCGAGAAGCTCTCGGTGGTGGACCTGGCCCAGGAGTTCGGCGTCAGCCGCCAGCCCATCATGACGTCCATGCGCGACCTGGCCGGCGACGGCTTCGTCATCATCACGCCCCAGGTGGGCTGCGAAGCCGCCGCGCCCGACAAGAACGAGATCCAGGATTTCTTCTCGGTCTTCGCAAAGATGGAAGGCCGCATGGCGGGCATGGCCGCCGAGCGCCACGACGACGCCGACATGGTCCAGTTGCGTGCCGCCCAGGCCAGCTTCGAACAGTCGCCCACCGGCGGCGGCCACTGGAACCTGGACAGCGTCAGCCATTTCCACAGCGTCATCCGCCACATGGCCCGCACGCCGGCCCTGGCCAACCGCATCGGCAAGTTCTGGCACATGGCCAACTACATCCTGCGCAACGGCCAGCGCGACTATCCCGAATCCGTGCGCACCGTCGGCAACCGCGAACGCGCCGGCATCGTGGCCGCCATCGCCGAACGCGATGCGCAGGGTGCCGAACGCGCCATGGAACTGCACGTGCTCGGCAAGCCGCACCGCGTCGGCCTGCTCTGA
PROTEIN sequence
Length: 230
MSSPLPHPSAFPPNGADLGAPAGKTGRILQILQARFASGHYRFGEKLSVVDLAQEFGVSRQPIMTSMRDLAGDGFVIITPQVGCEAAAPDKNEIQDFFSVFAKMEGRMAGMAAERHDDADMVQLRAAQASFEQSPTGGGHWNLDSVSHFHSVIRHMARTPALANRIGKFWHMANYILRNGQRDYPESVRTVGNRERAGIVAAIAERDAQGAERAMELHVLGKPHRVGLL*