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scnpilot_p_inoc_scaffold_271_151

Organism: SCNpilot_P_inoc_Burkholderiales_62_9

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: 154049..154807

Top 3 Functional Annotations

Value Algorithm Source
Flagellar brake protein YcgR n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=YCGR_LEPCP similarity UNIREF
DB: UNIREF100
  • Identity: 36.4
  • Coverage: 250.0
  • Bit_score: 148
  • Evalue 7.30e-33
type IV pilus assembly PilZ similarity KEGG
DB: KEGG
  • Identity: 36.4
  • Coverage: 250.0
  • Bit_score: 148
  • Evalue 2.10e-33
Flagellar brake protein YcgR {ECO:0000255|HAMAP-Rule:MF_01457}; Cyclic di-GMP binding protein YcgR {ECO:0000255|HAMAP-Rule:MF_01457}; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria similarity UNIPROT
DB: UniProtKB
  • Identity: 36.4
  • Coverage: 250.0
  • Bit_score: 148
  • Evalue 1.00e-32

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Taxonomy

Leptothrix cholodnii → Leptothrix → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 759
ATGAGGGAGCACCCGCTGCTGCCTCTGACGCCCGAGCCTGCCGGCGACGACGCCTCCTCGCTCGAGGACTTCCGCATCTCCCAGCCGCTGGAAATCCTGACCCTGCTCGGACGCATGGCCGAGCAGTCCGAAATCGTTGCCCTGGTCGCCGCCGACGGCGTGTCCTGCCTGTCGGCCATCGCCGGGGTGGACCGCGGCAGGCGCCTGCTGTGGCTGTTCGGCACCCCGGGCGATGCCCGCCTGGAGCACCTGCTCGCTTCGCCGTGGAAAGTGGCCGTCGGCTACCTCGATCACGTCAAGATCCAGTTCCGCGTCCACAACCTGCAATGGCTGCCCGGCGCCGACGTCGGCCGGCTGGCCTGCCTGCTGCCGCTGGAGCTGTACCGCTTCCAGCGGCGCTCGTACTTCCGCGTTCGCCCGGCCATGTATCCCGCGCCGGTGGTGCGGGCGCGCCGCGACCAGGCCGACGCTCCCGTCGAGCTGGAGGTGATCGACATCAGCATGACCGGGGTCGGCTTGCTGCTGCCGTCCGGCAGCCTGCCTTTCCCCGTGGGCACGCCGCTGCCGCGCGCGACGCTGGTCCTGGGTCCCGCGCTCCGGCTGCGGGTGGACCTGAAGGTAATGCATGTCACGCCGCGCCGGGCGCCGGAGCAGGGCCATCACATGGGCTGCACGCTGGACGGCCTGGACGAGGACGGCCTGCACGCCTTGCAGCACTTCATCAGCCAGGCGCAGTTGCGCCAGGGCGGTTCGTCATAG
PROTEIN sequence
Length: 253
MREHPLLPLTPEPAGDDASSLEDFRISQPLEILTLLGRMAEQSEIVALVAADGVSCLSAIAGVDRGRRLLWLFGTPGDARLEHLLASPWKVAVGYLDHVKIQFRVHNLQWLPGADVGRLACLLPLELYRFQRRSYFRVRPAMYPAPVVRARRDQADAPVELEVIDISMTGVGLLLPSGSLPFPVGTPLPRATLVLGPALRLRVDLKVMHVTPRRAPEQGHHMGCTLDGLDEDGLHALQHFISQAQLRQGGSS*