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scnpilot_p_inoc_scaffold_237_100

Organism: SCNpilot_P_inoc_Burkholderiales_62_9

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: comp(109192..110103)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HNH1_RUBGI similarity UNIREF
DB: UNIREF100
  • Identity: 57.4
  • Coverage: 296.0
  • Bit_score: 334
  • Evalue 1.50e-88
  • rbh
Galactose-binding protein regulator similarity KEGG
DB: KEGG
  • Identity: 67.1
  • Coverage: 292.0
  • Bit_score: 381
  • Evalue 3.00e-103
  • rbh
Galactose-binding protein regulator {ECO:0000313|EMBL:CDM23206.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Caste similarity UNIPROT
DB: UniProtKB
  • Identity: 67.1
  • Coverage: 292.0
  • Bit_score: 381
  • Evalue 1.50e-102

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Taxonomy

Castellaniella defragrans → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 912
ATGAAACTCAATCAGCTGCGGGATCTCGTGGCCATCGTCGAACATGGCGGGCTGCGCGCCGCCGCCCGCCGGCTCGGCGTGGCGCAGCCGCTGCTCACCCGCAGCGTGCGCGGCCTGGAAAAGGAACTGGGCACGCCGCTGTTCGAACGCCAGGCGCGCGGCATGGTGTTGACGCCGCTCGGCCGGCTGTTCCACGAACGCGCGCGCGGCATGGTCAACGAACTGCGCCGGGCGCGCGACGAACTGGCGCAGGCCCAGGGCTCGGGCGCCGGCACGGTCATCGCCGGCCTGTCCATCATGCCGCACATGGGCCTGCTGCCCCGTGCCCTGCCCGCCTTCCGGCGGCGCTATCCCCAGGTCTACCTGCAGCTCATCGAAGGCCTGTTCCCCGATCTCGAATCGCAGTTGCGCAGCGGCGCCATCGATTTCTACCTGGGCGCCGCGCCCGGCACCGTGCCGGCCGGCTTCATCGTCGAACCGCTGTTCTCGAACACCCGCGCCGTGGTCTGCCGCAAGGGACATCCGCTGGCGCGCTCGCGTTCGCTCAAGGCACTGGCCGGCGCCGAATGGGCCCTGCCCTCGACCGACTACGACAACCAGGACGACCTGGCGCGGCTGTTCCAGGAATACGGCCTGCCCGCGCCGCGCGTGGCGCTCCAGGCGCGCACCGCGCTGTCGATGATGGTCGCGCTGGCCAACAGCGACCTGCTCGCGCTGCTGCCGGTGCAATGGCGGGAATTCGACCTGACGCGCGATTCGCTGCAGGTGATCGCCGTGCGCGAAAGCCTGCCCGCGCCCGACATCGTGCTGATCCGGCGCGCCGAGATGCCCATGACGCCGGCGGCCGAACACCTGTGCGACCTCATGCAGCGCAACGCCCCGTCCCTCCAGCCCATGCGGGGCCGCGCATGA
PROTEIN sequence
Length: 304
MKLNQLRDLVAIVEHGGLRAAARRLGVAQPLLTRSVRGLEKELGTPLFERQARGMVLTPLGRLFHERARGMVNELRRARDELAQAQGSGAGTVIAGLSIMPHMGLLPRALPAFRRRYPQVYLQLIEGLFPDLESQLRSGAIDFYLGAAPGTVPAGFIVEPLFSNTRAVVCRKGHPLARSRSLKALAGAEWALPSTDYDNQDDLARLFQEYGLPAPRVALQARTALSMMVALANSDLLALLPVQWREFDLTRDSLQVIAVRESLPAPDIVLIRRAEMPMTPAAEHLCDLMQRNAPSLQPMRGRA*