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scnpilot_p_inoc_scaffold_237_107

Organism: SCNpilot_P_inoc_Burkholderiales_62_9

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: 116358..117551

Top 3 Functional Annotations

Value Algorithm Source
Secretion protein HlyD n=1 Tax=Cupriavidus basilensis OR16 RepID=H1SB71_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 59.8
  • Coverage: 428.0
  • Bit_score: 475
  • Evalue 5.40e-131
  • rbh
Secretion protein HlyD {ECO:0000313|EMBL:EHP40219.1}; TaxID=1127483 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus basilen similarity UNIPROT
DB: UniProtKB
  • Identity: 59.8
  • Coverage: 428.0
  • Bit_score: 475
  • Evalue 7.50e-131
Cobalt/zinc/cadmium efflux RND transporter, membrane fusion protein, CzcB family similarity KEGG
DB: KEGG
  • Identity: 59.3
  • Coverage: 430.0
  • Bit_score: 473
  • Evalue 5.70e-131

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Taxonomy

Cupriavidus basilensis → Cupriavidus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1194
ATGTCGACAACGAACAAACAAAAGGCCGCGATGGCGGCCATCCTGATTGCGGGCGCGCTGGCGGTGGCCGGCGTGCTGTTCTGGCCCGAGCCGCATGGCGAGGGTGACGGCCATGGCCATGGTGGCGAGACGCCGGCCGGCGCGTCCGCCGACGATCATGCCGACGACGGCCTGGTGAAGCTGAGCGAGGCCCAGGCCCAGGCCGCCGGCATACGCACGGCCGAGGCCGGCCCCGGCGTGCTGCGGCCGACCCGGGAGTTTCCGGGCGAGATCCGCTTCAACGAGGACCGCACGGCTCACGTCGTGCCCCGGCTGGCCGGCATCGTCGAGCGCGTGTCGGCGGACCTGGGACAGCAGGTCCGCAAGGGCCAGGTGCTGGCCGTGATCGCCAGCACGTCGCTGTCGGACCTGCGCAGCGAGCTGCTGGCCGCGCGCAAGCGCGAGGACCTGGCCGAGGAAACCTTCGTGCGGGAAAAGAAATTGTGGGAAGAGCGTGTGTCCGCCGAGCAGGACTACCTGCAGGCGCGCACCGCGCGGGAAGAGGCCAGGATCGCCGTGCAGAACGCCGCGCAGAAGCTCCTGGCCGTGGGCGCGGCGGGCCAGGCGCCCGCGCTGAACCAGTACGAGCTGCGCGCGCCCTTCGACGGCACGGTGGTCGAGAAGCACATGGCCATGGGCGAGGCGGTGGGCGATACCACCGCCGTGTTCACCATCGCCGACCTGAGTACGGTCTGGGCCGAGTTCATCGTGGCCCCGCAGGACCTGGCGGCCGTGCGCGTCGGCGAAAAGGTCAGCATTTCCTCGTCCGCCCTGAACGAGACGGCCGAGGGGGCGGTGTCCTACGTCGGCCCGCTGCTGGGCGCGCAGACCCGCACCGCCACCGCCCGCGTCACGCTGGCCAATCCCGGCATGGCCTGGCGCCCCGGACTCTTCATCACCGTCAAGGTGCTGCGCGGCGAAGAGTCCGTGGCCCTGGCCGTGCCGGCCGATGCCATCCAGACCGTGGGCGATGACAGTGTGGTGTTCACCGTCGTGCCTGGCGGTTTCAAGGCGCAGCCGGTGAAGACCGGCCGCCGCGACGGCCTGCGGGTGGAAGTGTTGGAAGGCCTGGCTCCCGGCGCGCGCTACGCCGAGACCAATACCTTCACGCTCAAGGCCGAGCTGGGCAAGGCCAGCGCCGAGCATACCCACTAG
PROTEIN sequence
Length: 398
MSTTNKQKAAMAAILIAGALAVAGVLFWPEPHGEGDGHGHGGETPAGASADDHADDGLVKLSEAQAQAAGIRTAEAGPGVLRPTREFPGEIRFNEDRTAHVVPRLAGIVERVSADLGQQVRKGQVLAVIASTSLSDLRSELLAARKREDLAEETFVREKKLWEERVSAEQDYLQARTAREEARIAVQNAAQKLLAVGAAGQAPALNQYELRAPFDGTVVEKHMAMGEAVGDTTAVFTIADLSTVWAEFIVAPQDLAAVRVGEKVSISSSALNETAEGAVSYVGPLLGAQTRTATARVTLANPGMAWRPGLFITVKVLRGEESVALAVPADAIQTVGDDSVVFTVVPGGFKAQPVKTGRRDGLRVEVLEGLAPGARYAETNTFTLKAELGKASAEHTH*