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scnpilot_p_inoc_scaffold_547_15

Organism: SCNpilot_P_inoc_Burkholderiales_62_9

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: 11148..13115

Top 3 Functional Annotations

Value Algorithm Source
Probable conjugal transfer protein VirD2 n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9IEW8_BORPD similarity UNIREF
DB: UNIREF100
  • Identity: 76.2
  • Coverage: 655.0
  • Bit_score: 999
  • Evalue 1.80e-288
  • rbh
virD2; conjugal transfer protein VirD2 similarity KEGG
DB: KEGG
  • Identity: 76.2
  • Coverage: 655.0
  • Bit_score: 999
  • Evalue 5.00e-289
Probable conjugal transfer protein VirD2 {ECO:0000313|EMBL:CAP44919.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Borde similarity UNIPROT
DB: UniProtKB
  • Identity: 76.2
  • Coverage: 655.0
  • Bit_score: 999
  • Evalue 2.50e-288

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Taxonomy

Bordetella petrii → Bordetella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1968
ATGGCTAGGTCCGACGAGGACCGTTTCCGGCCACGTCCCGCGCCGCCCCGACAGCGCGGTGCTGACGGCGAGCGCTTCGTGTCGCTCGTGCGCCGCCAAGCTGCCAAAGCGGGCCAGGCGGCCGGTCGCTCGGCACGCGGCAGCCAGTTCGGCCGGGGCCGGGCGGCGACGCGATTGCGAACCGGGTCGGCGTCGCTGCGCAGCCGGCGCGTGGTCATCAAGTCGCGGTTTGTGTTGGTCCGCCCCGGTTCCGACGCCATCGCGGCGCACCTGCGCTACATCGAACGCGACGGCGTGACCCGCGAGGGCGAGCGCGGCCAGGCCTACGGCACTGAGACCGACGAAGCGGACACGCAGGCCTTCGTGGCGCGCAGCCAGGACGACCGGCACCAGTTCCGCTTCATCGTCTCCAGCGAAGATGCAGGCGAGTTGGGCGACCTGCGCGCCTTCACCCGCACGCTGATGCGGCGCATGGAGGTTGACCTGCAAACCCGGCTGGACTGGATCGCGGTGGACCACTACGACACGGACAACCCACACACGCACATCGTGCTGCGCGGGCGCGCCGATAATGGGCAGGATCTGGTCATTGCGCCGGAGTATATGAGCCACGGCATGCGCGAGCGCGGGGCCGAGCTGGCGACCGAATGGCTGGGGCCGCGCACGGAGCGCGAGATCGCCGATACCTTGCAACGGGAAACCCAGCAGGAGCGGTTCACGACGCTGGACCGGACACTGCTGCGCATGGCGGGCGATACCGGCCTGGTGGATACGTCGGGATTGCGAGGCGACGTGCCTTACCAATGCGCGCTGGCCGCCCGCTTGCAGCACTTGGCCGGCATGGACCTGGCTCATCCTTCAGAGGCGGGCCAGTGGCGGCTGGACGAGCAGATGGAAGCCCCCTTGCGCCGCCTAGGTGAGCACGGCGACATCCTGCGCGCGCTGCACCGGGCCATGCGCGACCAGGCGCGGGAGTTCGTCATCGAAACGGGGCCGGAAGTACGCGAGCCGATCATTGGCCGCATCGCCGGCAAAGGACTGGTCAACGAGCTGAGCGATCGCAGCTACATCGTGATCGATGGGGCCGACGGCCGGGCGCATTACCTCGCGCTGCCACCCGGCATGGTGCTGGCGGATTTCCCCAGCGGCGGCGTCGTGGAAGTGCGGCCCATCCCCAAGAGTGCAGCCGACAAGAACATCGACCGGCTGGCGCCAGACGGCATCTATCGGACGGCCGACCATCTGGCCGAACTGCAACGCAGCCAGGCCAACGACAGCCGCGCCAAAGGGCGGGGCCAGGAACGCCGCCCGAGTCCAGAGTCTGTCGTGCGCTCGCACGTCATGCGGCTCGAAAGCATGCGCCGCGCCGGCATCGTCGAACGCATCGAGGATGGCGTCTGGAAAGTGCCGGGCGACCTGTGCGAGCGCGGGCGGGAACATGACCTGAAGCTGCGCCACGGCATCCACGTTGCCGTGCCGTCCCACCTGCCGCTGGCACGCCAGATCAATGCGCTGGGCGCGACTTGGCTGGACCGCAAACTGATCGACGGCGGCAAAGAGCTGACTGGGGCAGGCTTCGGCGGAGAGGTCCGAGAGGCCATGCAGGCGCGAGCAGCCTACCTGGAGCGTGAAGGACTGGCCAAGCGCCAGGGTGAGCAAGTCATCGTCGCGCGCCGGCTGCTGCACGCCTTGCGCGACCGGGAAGTGGCCGCAACCGCCCAGACGATCGCGGCCGAGACAGGTCTGACCTATAAGCCGCTCGGCGAGGACGGCCAAGCCAGCGGCGTCTATCGGCGCTCCGTCACGCTGGCCAGCGGCCGCTATGCGATGCTCGACGACGGGCTCGGTTTTACGCTGGTGCCGTGGCGACCGATTCTCGCGCAGCGTCTGGGAGAATCCATGTCCGTGTCAATTGAGAATGGCCGGGCGACATGGAGTTTCGGGAGGTCAAAATCCCTAACGCTATGA
PROTEIN sequence
Length: 656
MARSDEDRFRPRPAPPRQRGADGERFVSLVRRQAAKAGQAAGRSARGSQFGRGRAATRLRTGSASLRSRRVVIKSRFVLVRPGSDAIAAHLRYIERDGVTREGERGQAYGTETDEADTQAFVARSQDDRHQFRFIVSSEDAGELGDLRAFTRTLMRRMEVDLQTRLDWIAVDHYDTDNPHTHIVLRGRADNGQDLVIAPEYMSHGMRERGAELATEWLGPRTEREIADTLQRETQQERFTTLDRTLLRMAGDTGLVDTSGLRGDVPYQCALAARLQHLAGMDLAHPSEAGQWRLDEQMEAPLRRLGEHGDILRALHRAMRDQAREFVIETGPEVREPIIGRIAGKGLVNELSDRSYIVIDGADGRAHYLALPPGMVLADFPSGGVVEVRPIPKSAADKNIDRLAPDGIYRTADHLAELQRSQANDSRAKGRGQERRPSPESVVRSHVMRLESMRRAGIVERIEDGVWKVPGDLCERGREHDLKLRHGIHVAVPSHLPLARQINALGATWLDRKLIDGGKELTGAGFGGEVREAMQARAAYLEREGLAKRQGEQVIVARRLLHALRDREVAATAQTIAAETGLTYKPLGEDGQASGVYRRSVTLASGRYAMLDDGLGFTLVPWRPILAQRLGESMSVSIENGRATWSFGRSKSLTL*