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scnpilot_p_inoc_scaffold_547_52

Organism: SCNpilot_P_inoc_Burkholderiales_62_9

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: 52042..53463

Top 3 Functional Annotations

Value Algorithm Source
Type II and III secretion system family protein 1 n=1 Tax=Achromobacter piechaudii HLE RepID=J4YM24_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 56.6
  • Coverage: 412.0
  • Bit_score: 463
  • Evalue 1.90e-127
  • rbh
Type II and III secretion system family protein 1 {ECO:0000313|EMBL:EJO31708.1}; TaxID=1156919 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.6
  • Coverage: 412.0
  • Bit_score: 463
  • Evalue 2.70e-127
Type II/IV secretion system secretin RcpA/CpaC similarity KEGG
DB: KEGG
  • Identity: 54.2
  • Coverage: 430.0
  • Bit_score: 451
  • Evalue 2.80e-124

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Taxonomy

Achromobacter piechaudii → Achromobacter → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1422
ATGAGGGTTGCGGTGATGAAGCAAGTCCTGAGAGGCGGTCTCGGCATTGCGTTCGCCGTTCTGGATGGCGCGGCGCGGGCAGCGGAGACAGCCGCCGCCGACTGGCCGGCCTGGCTCGAACAGGAGTCGGTGCCTGCACCGGCCCAGCCTTTCCCCGCCGGCCAGGATCTTCCGGACGTCGAAATGTACATAGGCGAGACCCAGGTGTTCCCGGCGCCTGGTGTCGGGCGGGTGGCCGTGGGCAATGGCCGCGTCATCAACGCCGCCACGGCCGACGACCGGGAGGTGGTGGTGTTCGCCAACGCGGCCGGCACGTCGTCGCTGGTCATCTGGGACCGCGAAGGCGTGATGCGGCGCATGCGCATCACCGTGGTGCCGGGCCAGTCCTCGAGGGTGCAGCGCGAGATCGAGGCCTTTCTCGCCAGTATGCCCTCGGTGCGCAGCCGGCTTGTCGGCGACAAGGTCATCGTCGAAGGCGACGATCTGAGCGATGCGGACCAGGCGCGCGTCGCGCTGCTGGCACGCCGCTATCCGCAGGTCGTCGATTTCACCGGGCGGCTCGGCTGGGAGCGCATGGTGATGATGGACGTCAAGGTGGTCGAGATGCCGCGTTCGCGGCTGCGCGAACTGGGCGTGCGCTGGGACGGCGCGAGCACCGGCGGCCTGAACGCGGGCCTGGCCTGGGACGCCGCGGTAGGGCGGCCTCTGCGGGCGGCCGCCGGCGACGCCGAGCAGCGGCCCGGGGGCGGTCCCATCGCGCTGCCGTTCCCGGCCACGTCCCCGGCGGGATACCTGGGCATGAACGCCCTGCTGTCCGCGCGCATCCAGGCGATGGCCCAGAGCGGCGAGGCGGTCATCCTGGCCCAGCCGCAGTTGTCGGCGCGCAGTGGCTCCACCGCCCGTTTTCTCGCGGGCGGGGAAGTGCCCTATGCGACGGTGGACAGGAACGGCGCGTCGAACACTACCTTCAAGCCCTACGGCGTCACCTTGCAGATCGCGCCCCGGGTCGATGCCGGCGGCACGGTGCGGTCCGTCATCGACGTCGAGGTCAGCGCCGTGGATCCGTCCGTGATGGCCACGGGCGGCCCCGCGCTCAAGGTGCGCAGGACCGCCACGGAGTTCAACGTGCGTTCGGGCGAGACACTGGTCCTGAGCGGCTTCCTGTCGCGCGAGCAGTCCCAGGACCTGGACGGGTTGCCCGGCCTGTCGAGCCTGCCCATCCTCGGGCCCCTGTTCGGATCGCGCAGGTTCCAGCGGCGCGAGACCGAGCTGGCCATCTTCGTCACCCCGACCGTCGTCACCCAGCGCAATCCCGATCTGCGGGAACGCATCGACCGCGGGCAGCGGGTGCTGGACCAGACCTTCGGGCCGGAACAACTGAACGTGCCCGTGCGGCCCGACGTATCTTTCATGGAGCGATGA
PROTEIN sequence
Length: 474
MRVAVMKQVLRGGLGIAFAVLDGAARAAETAAADWPAWLEQESVPAPAQPFPAGQDLPDVEMYIGETQVFPAPGVGRVAVGNGRVINAATADDREVVVFANAAGTSSLVIWDREGVMRRMRITVVPGQSSRVQREIEAFLASMPSVRSRLVGDKVIVEGDDLSDADQARVALLARRYPQVVDFTGRLGWERMVMMDVKVVEMPRSRLRELGVRWDGASTGGLNAGLAWDAAVGRPLRAAAGDAEQRPGGGPIALPFPATSPAGYLGMNALLSARIQAMAQSGEAVILAQPQLSARSGSTARFLAGGEVPYATVDRNGASNTTFKPYGVTLQIAPRVDAGGTVRSVIDVEVSAVDPSVMATGGPALKVRRTATEFNVRSGETLVLSGFLSREQSQDLDGLPGLSSLPILGPLFGSRRFQRRETELAIFVTPTVVTQRNPDLRERIDRGQRVLDQTFGPEQLNVPVRPDVSFMER*