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scnpilot_p_inoc_scaffold_551_6

Organism: SCNpilot_P_inoc_Burkholderiales_62_9

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: comp(5336..5977)

Top 3 Functional Annotations

Value Algorithm Source
TetR family transcriptional regulator n=2 Tax=Bordetella holmesii RepID=M5NIW5_9BORD similarity UNIREF
DB: UNIREF100
  • Identity: 60.0
  • Coverage: 205.0
  • Bit_score: 238
  • Evalue 7.70e-60
Transcriptional regulator, TetR family {ECO:0000313|EMBL:KCB37670.1}; TaxID=1331258 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordet similarity UNIPROT
DB: UniProtKB
  • Identity: 61.4
  • Coverage: 202.0
  • Bit_score: 240
  • Evalue 1.70e-60
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 60.4
  • Coverage: 207.0
  • Bit_score: 234
  • Evalue 3.10e-59

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Taxonomy

Bordetella sp. 8-296-03 → Bordetella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 642
ATGCCCACACCCGCTTCCCGCCCTGCTCCCCGGCGCCGCCAGGGCCGTCCGCCCGTGGTGGCCGACGCGCGCGAGCGCATCCTGCTGGAAGCCTCGAAGCTGTTCGCGCAAAGCGGCTACGAAAGCAGTTCCATCGGCGAACTGGCCGCCGCCATTGGTGTTTCCAAGCCGGCCATCTATCACTACTTCGCCACCAAGCAGGACATCTACGACGCCATCATCCTCCAGGCGCTGCAAGGCCTGACCGATGCCGTCGTGCCGGCCGTGAACGCCCAGCCGGACCCGCTGGACAAGCTGCGCGTCTTCATGACGGCGCACGCGGCCTACCTGGAACGCAACTACTGGAGCTTTGTCGCCATGCTGGTGGGCTTCAGCGGCATGAGCCCCAGCTACCGCGACGACGCCGCGCGGCTGCGCGACGCCTACGAACGCCTGCTGCGCCAGATCCTGGAGCAGGGCGCGCGCGAAGGGGTGTTCCGGCCGGGACAGGTCGTGACCTCGGGGCGCGCCGTGCTGTCGCTGCTCAACTGGATGGCGCGCTGGTTCAAGCCCGGCCACGGCAGCACGGCCGAACAGATCGCGCTCGACTATTTCGAACTTCTATCCGCCGGCCTGTGTGTCAGGCCGGCTACCACTTCCTAA
PROTEIN sequence
Length: 214
MPTPASRPAPRRRQGRPPVVADARERILLEASKLFAQSGYESSSIGELAAAIGVSKPAIYHYFATKQDIYDAIILQALQGLTDAVVPAVNAQPDPLDKLRVFMTAHAAYLERNYWSFVAMLVGFSGMSPSYRDDAARLRDAYERLLRQILEQGAREGVFRPGQVVTSGRAVLSLLNWMARWFKPGHGSTAEQIALDYFELLSAGLCVRPATTS*