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scnpilot_p_inoc_scaffold_2161_10

Organism: SCNpilot_P_inoc_Burkholderiales_62_9

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: comp(10467..11942)

Top 3 Functional Annotations

Value Algorithm Source
Outer membrane drug efflux protein n=1 Tax=Herbaspirillum frisingense GSF30 RepID=R0EDZ0_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 70.8
  • Coverage: 493.0
  • Bit_score: 669
  • Evalue 2.40e-189
  • rbh
Outer membrane drug efflux protein {ECO:0000313|EMBL:EOA04021.1}; TaxID=864073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herba similarity UNIPROT
DB: UniProtKB
  • Identity: 70.8
  • Coverage: 493.0
  • Bit_score: 669
  • Evalue 3.40e-189
outer membrane drug efflux protein similarity KEGG
DB: KEGG
  • Identity: 69.5
  • Coverage: 501.0
  • Bit_score: 659
  • Evalue 9.10e-187

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Taxonomy

Herbaspirillum frisingense → Herbaspirillum → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1476
ATGAAGAAGAGTTTGCGCAGCGCGGCGCTGGTGGCCTTGCTCGTGCTGGCGGGCTGCGCGGTGGCGCCGCCCTACGATCCCCCCCGCGCCGACGTGCCGGCCTCGTTCAAGGAAGCGGCCGGCGGCAACTGGAAGGCCGCCCAGCCGGCCGAGCAAGCCCATCGGGGGCGCTGGTGGGCGGTGTTCGGCGATCCGGTGTTGGACCAGCTGCAGGAACGGGCCGCGGATGCGAACCAGAACCTCAAGGCCGCGGTGGCGCGCCTGGCGCAGGCCAGGGCGCGGCTGGGCGAGGCGCGGGCCGACCGGTATCCCCGTGTCGATGCGGGCGCGGGGCCCACGCGGCAGCGGCCGTCGCCGGCTTCAAGAGGGCTGCCCGCCGAGGCGAACACGTCGCCCTCGACGCTGTGGCGAGCCCAGGCTTCCGTGGCCTACGAAGTGGACCTGTTCGGCCGGGTCGCGGCCAGTGTCGACGCGGCGTCGGCCCAGGCCGAGCAGGGCGAGGCCTTGTTGCGCTCGGTGCAGTTGGCCGTACAGGCCGACGTCGCGCAGGCCTATTTCCTGGTGCGCGAACTGGATGCCGGGCAGGAGCTCTACGGCGGCACGGTGGCGCTGCGCGAGCGCACGCTGGCGCTGATCCAGCGCCGCTACGACGAAGGCGACATCAGCGAGCTGGACCTGGCTCGGGCACGCACGGAACTGGCCTCGGCACGGTCCGAGGCGCTGGACATCGCCCGCCAGCGCGCGGCGGCCGAGCATGCGCTGGCCATCCTGCTGGGCGAGGCGCCCGCCGCCTTCGGCCTGCCCGCGCGGCCGCTGGCCAGGCTGGCGGTATCGGTGCCGCCGGGCCTGCCGTCCGACCTGCTGGAGCGCCGGCCCGACATCGCCGCGGCCGAACGCGCGATGGCCGCCGCCAACGCCCGTGTCGGCGTCGCGCGCACGGCCTTCTTCCCCAGGCTGGAACTGACCGGCGCGCTGGGCTACGAGTCGGCGCAACTGAGCGACCTGTTCAACTGGTCCAGCCGTACCTTCCTGCTGGGGCCGCTGGTGGGCACCATGCTGACACTGCCCATCTTCGACGGCGGGCGGCGCGAGGCGGGCTTGCAGGCCGCGCGGGCGGCCTACGAAGAAGAAGCCGCCAATTACCGGCAGACGGTGCTCACGGCCTTCAAGGAAGTGGAGGACAATCTGGCCAACCTGCGCATCCTGGCCGACCAGTACCGCGCGCAGGACGAAGCGGTGGCGTCCGCCGCGCGAGCGGCGCGGCTGTCGCAGATCCAGTATCGCGAAGGCTCGGTGAGCTACCTGGACGTGATCGATGCCGATCGCAGCGTGCTCCAGCAGCGCCGGGTGGCGACCCGCCTGGATGGGGAGCTGGCCCGTTCCACGGTCAACCTGATCCGTGCGCTGGGCGGCGGCTGGGAAGGGCAGGCACCGGCGCCCGCGGCGGCGCTGTTGCCCGCGCGCCAACCTTCGTAA
PROTEIN sequence
Length: 492
MKKSLRSAALVALLVLAGCAVAPPYDPPRADVPASFKEAAGGNWKAAQPAEQAHRGRWWAVFGDPVLDQLQERAADANQNLKAAVARLAQARARLGEARADRYPRVDAGAGPTRQRPSPASRGLPAEANTSPSTLWRAQASVAYEVDLFGRVAASVDAASAQAEQGEALLRSVQLAVQADVAQAYFLVRELDAGQELYGGTVALRERTLALIQRRYDEGDISELDLARARTELASARSEALDIARQRAAAEHALAILLGEAPAAFGLPARPLARLAVSVPPGLPSDLLERRPDIAAAERAMAAANARVGVARTAFFPRLELTGALGYESAQLSDLFNWSSRTFLLGPLVGTMLTLPIFDGGRREAGLQAARAAYEEEAANYRQTVLTAFKEVEDNLANLRILADQYRAQDEAVASAARAARLSQIQYREGSVSYLDVIDADRSVLQQRRVATRLDGELARSTVNLIRALGGGWEGQAPAPAAALLPARQPS*