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scnpilot_p_inoc_scaffold_2502_12

Organism: SCNpilot_P_inoc_Devosia_62_4

partial RP 38 / 55 BSCG 38 / 51 ASCG 9 / 38
Location: comp(9212..9754)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiacea similarity UNIPROT
DB: UniProtKB
  • Identity: 82.1
  • Coverage: 179.0
  • Bit_score: 306
  • Evalue 2.10e-80
ribosomal large subunit pseudouridine synthase E n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC9A7 similarity UNIREF
DB: UNIREF100
  • Identity: 76.1
  • Coverage: 180.0
  • Bit_score: 278
  • Evalue 4.40e-72
pseudouridylate synthase similarity KEGG
DB: KEGG
  • Identity: 76.7
  • Coverage: 180.0
  • Bit_score: 274
  • Evalue 3.00e-71

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Taxonomy

Devosia chinhatensis → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 543
ATGTCGCGCCTTATCCTCTTCAACAAGCCGTTCAATGTCCTCACCCAGTTTACCGGCGAAGGCCGGACACTGGCGGAGTTCATCACCGTGCCGGGGGTCTATGCCGCCGGCCGGCTGGACAAGGACAGCGAAGGGCTGCTGCTGCTGACCGATGACGGCAGGTTGCAGGCGCGGATTGCCGACCCGAAATTCAAGCTGGAAAAGACTTATCTGGTGCAGGTGGAAGGGGTGCCGACACCCGAGGCGCTGGAGCGTCTGCGCCGGGGCGTAGAACTCAATGATGGGCCGACGCGGCCGGCCAAGGCGGAAATGATCGAGCCACCCGAACTCTGGCCGCGCGATCCGCCGGTGCGGTTTCGCAAGAGCGTGCCGGACAGCTGGCTGTCGCTCACCATCAGCGAGGGACGCAATAGGCAGGTGCGGCGGATGACGGCGGCAGTGGGTTTCCCGACACTGCGGCTGGTGCGCTGGCGCATCGGGGAGTGGACGCTGGACGGACTGGGGCCCGGAGACTGGCGCGAGACCGGGCCCAAGCGGCGCTGA
PROTEIN sequence
Length: 181
MSRLILFNKPFNVLTQFTGEGRTLAEFITVPGVYAAGRLDKDSEGLLLLTDDGRLQARIADPKFKLEKTYLVQVEGVPTPEALERLRRGVELNDGPTRPAKAEMIEPPELWPRDPPVRFRKSVPDSWLSLTISEGRNRQVRRMTAAVGFPTLRLVRWRIGEWTLDGLGPGDWRETGPKRR*