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scnpilot_p_inoc_scaffold_5446_1

Organism: SCNpilot_P_inoc_Devosia_62_4

partial RP 38 / 55 BSCG 38 / 51 ASCG 9 / 38
Location: comp(233..1525)

Top 3 Functional Annotations

Value Algorithm Source
Diaminopimelate decarboxylase {ECO:0000313|EMBL:AHK01527.1}; EC=4.1.1.20 {ECO:0000313|EMBL:AHK01527.1};; TaxID=1435057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae similarity UNIPROT
DB: UniProtKB
  • Identity: 64.6
  • Coverage: 426.0
  • Bit_score: 539
  • Evalue 3.50e-150
Diaminopimelate decarboxylase n=1 Tax=Agrobacterium tumefaciens 5A RepID=H0HAU5_RHIRD similarity UNIREF
DB: UNIREF100
  • Identity: 64.6
  • Coverage: 426.0
  • Bit_score: 539
  • Evalue 4.30e-150
  • rbh
lysA; diaminopimelate decarboxylase similarity KEGG
DB: KEGG
  • Identity: 64.6
  • Coverage: 426.0
  • Bit_score: 539
  • Evalue 7.10e-151

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1293
ATGTCCAGTCCTGAAGCCCCCAAGCCACCGCACGGCCCGGATTTGGCCAGGACGCAATTTGCCGTTTCTGGCCCGGATCTGGTCATCGGCGGGTTACGCGTTGCCGAGATTGTCGAGACCGTCGGCTCGCCGGTGTTCATCTATGACGCCGATGCCATGCGGCAGAGTTATCGCGCGCTTGCCGCAGCGCTCGATGGGTTTGCCGCGATCCACTACTCGGTAAAGGCCAATCCGGCGAAAGGAGTGATTTCACTGTTTCTCGCCGAAGGCGCGGGGGTGGAGATCGCGTCGCTGGGCGAATATCGGGCGGCCCGGCTGGCAGGCGCGCGCGCAGAGCAAATCCTCTTTGCCGGCCCGGGAAAACGTCGCGGCGAGCTCGAGGCGGTTATTGGCGAGGGCATAGGCGAAATTCACCTCGAGACCGTAGAGGAAATCGAGCGGGTGTCCGAGATCGCCACGCGGCTTGGACGATTGGTGCGGGTTTCGTTACGGATCAATCCCGTTGCGGCGGCACAGGCCGGGGCCATGCGCATGGGCGGCAAGCCCACGGCCTTCGGCTTTTGCGAGGAGGATATCGACGGCGTGCTCGACCTTGTGCGACATGCTCCAGGGATCGCGCTGGTCGGCATTCATGTCTATGGCGGCACGCAGATCCTGGAGGCAGCCGCACTGCTGAACCAGTGGCAGCATGGCATTCGCATCGCTGGTGACATCGCCGAAAAGTGGGGCGGGCCGCTGGAAACGATTGATTTGGGCGGGGGCCTGGGCATTCCTTACTACGCCGGGGAAGCGCCGCTGGACCTGAATGCGGTCGCTGCCGGACTGCCGCAGTTGTCCAGCCAGCTTCGATCGCATCCGCTGCTGCAGGCCGCCAATGTAATCGTCGAGCCGGGCCGGTTTCTGGCCGGGCCGGGTGGGGCCTATGTGGCCGAGATCAACGCGGTAAAGCATTCTCGCGGGACGCGCTTCGTCATCACTGATGGCGGCATGCATCACCATTTGGCTGCCTCCGGCAATCTCGGGCAGATCATCAAGCGGGATTTTCCGGTTGTTGCGGCCAGTCGCATGGACGAGGGTGCTCTTTACCCGGCCACGGTCGTTGGTCCGCTGTGCACGCCGCTCGATACGCTGGCGCGCGAAGCACTGCTTCCCGAACTCAAGGCAGGCGATCTGATTGCGGTACTGCAGTCGGGTGCCTATGGCGCGACGGCGAGCCCGTCTGGCTTTCTCAGCCACCCAGCGGCCGCGGAGGTTATTGTCGAGGCCGGGACCATGCGATCGGCACAGCTGTGA
PROTEIN sequence
Length: 431
MSSPEAPKPPHGPDLARTQFAVSGPDLVIGGLRVAEIVETVGSPVFIYDADAMRQSYRALAAALDGFAAIHYSVKANPAKGVISLFLAEGAGVEIASLGEYRAARLAGARAEQILFAGPGKRRGELEAVIGEGIGEIHLETVEEIERVSEIATRLGRLVRVSLRINPVAAAQAGAMRMGGKPTAFGFCEEDIDGVLDLVRHAPGIALVGIHVYGGTQILEAAALLNQWQHGIRIAGDIAEKWGGPLETIDLGGGLGIPYYAGEAPLDLNAVAAGLPQLSSQLRSHPLLQAANVIVEPGRFLAGPGGAYVAEINAVKHSRGTRFVITDGGMHHHLAASGNLGQIIKRDFPVVAASRMDEGALYPATVVGPLCTPLDTLAREALLPELKAGDLIAVLQSGAYGATASPSGFLSHPAAAEVIVEAGTMRSAQL*