ggKbase home page

scnpilot_p_inoc_scaffold_7211_7

Organism: SCNpilot_P_inoc_Devosia_62_4

partial RP 38 / 55 BSCG 38 / 51 ASCG 9 / 38
Location: comp(2516..2785)

Top 3 Functional Annotations

Value Algorithm Source
Integrase/recombinase xerD n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CWX1_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 83.1
  • Coverage: 89.0
  • Bit_score: 144
  • Evalue 6.40e-32
Phage integrase {ECO:0000313|EMBL:BAR63376.1}; TaxID=1355477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoeffic similarity UNIPROT
DB: UniProtKB
  • Identity: 85.4
  • Coverage: 89.0
  • Bit_score: 145
  • Evalue 4.00e-32
integrase family protein similarity KEGG
DB: KEGG
  • Identity: 83.1
  • Coverage: 89.0
  • Bit_score: 143
  • Evalue 2.30e-32

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bradyrhizobium diazoefficiens → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 270
GTGGGGCCGGTACTGCTGCATGATCAGGAGGTCGCCCGGCTGGTCAAGCGTGCAGCCATAGCAGCTGGCGTGCGAGGCGATCTTTCGGAGGACGAACGCCAGGGAAAATTCGCCAGCCATTCGCTCCGCGCCGACCTTGCTTCCTCAGCGGAAGTCGATGAACGCAATGTACAAAAGCAACTCGGCCATGTTTCGGCTGAGATGACCCGGCGCTATCAGCGGCGTCGCGATCGGTTTCGGGTCAATCTCACCAAGGCCGCCGGGTTGTAG
PROTEIN sequence
Length: 90
VGPVLLHDQEVARLVKRAAIAAGVRGDLSEDERQGKFASHSLRADLASSAEVDERNVQKQLGHVSAEMTRRYQRRRDRFRVNLTKAAGL*