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scnpilot_p_inoc_scaffold_7586_4

Organism: SCNpilot_P_inoc_Devosia_62_4

partial RP 38 / 55 BSCG 38 / 51 ASCG 9 / 38
Location: 2948..5218

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoD n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RGS2_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 77.8
  • Coverage: 681.0
  • Bit_score: 978
  • Evalue 4.80e-282
  • rbh
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphom similarity UNIPROT
DB: UniProtKB
  • Identity: 93.6
  • Coverage: 668.0
  • Bit_score: 1220
  • Evalue 0.0
RNA polymerase sigma factor RpoD similarity KEGG
DB: KEGG
  • Identity: 77.8
  • Coverage: 681.0
  • Bit_score: 978
  • Evalue 1.40e-282

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Taxonomy

Devosia chinhatensis → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2271
ATGGCCACCAAGGTTGCGAACAAAGCCAGCAAGGACACCGAGAAGCCGGAAGCCGGCGCCCCGGAAGCGTCCAATGACAGTCCGCTGATCGACCAGAACGATGCGGCCGTCAAAAAGCTGATCAAGGTCGCCAAGAAGCGCGGCTATGTGACCTATGAAGAGCTCAATGCCGTCCTGCCCTCCGACGAGGTAAGCTCGGAGCAGATCGAAGACTTCATGTCGATGTTCTCCGAAATGGGCATCAATGTCGTCGACGAGGACGAGGTCGAAGAGACTGAAGTCGAGAAGGACGAGGACGATAGCGGCACCGAGGTCGCTACCTCGGCCGGCACCGCGCTCGCCAGCACCTCCAATACCAAATCGGGCAGCGACCGCACCGACGACCCCGTGCGCATGTATCTGCGCGAAATGGGCTCGGTCGAGCTTCTGAGCCGCGAGGGCGAGATCGCCATCGCCAAGCGCATCGAGGCCGGCCGCGAGACCATGATCGAAGGTCTGTGCGAAAGCCCGCTGACCTTCCAGGCCATTATCATCTGGCGCGACCAGCTCGCCCAGGGCGAAATCCTGCTGCGCGACATCATCGACCTCGAAGCCACCTATGCCGGCCCCGATGCCAAGCAGGCGGCGCCCGAGATCCCGGTGGCCCCGGCCCGCCCCGAGCCCGAGCCTGCCAAGGAAAAGGCCAAGCCTGCGCCCAAGCGCGCCTCGAGCGGCGATGACGACGACTATGTGCCGGAAGAGCCCGAGCCGCCGCAGGACCCGGTCGAGGACGACGACGACGAATTCGACAACGCCCTGTCGCTGTCGGCCATGGAAGCCGAGCTCAAGCCGCAGGTGGTGGAGACCTTCAACCGCATCGCCGAGGCCTATGGCCAGATGCGCGAAATGCAGGATCGCCATGCCGAGGATCGTTCGGCCACCGTATCCGACGCCGAGAACGAACGCCTGGGCGCGCTGCGCGGCGAGGTGATCGCCGACGTGAAGTCGCTGTCGCTGAACACCAGCCGTATCGAAAGCCTGGTCGAGCAGCTCTACGACATCAACAAGCGCCTGGTGCGCTTCGAGGGGCGCCTGCTGCGCCTTGCGGAAAGCTATGGCGTCAAGCGCGAGAAGTTCCTCGAGAACTATTATGGCCGCGAGCTCGACCCCAGCTGGGAATGGGAAGTCGAGAATTTCGATGGCAAGGGCTGGGGCGAGTTTGCCCGCCGCGAAGTCGACACCATCAAGGAAATCCGCACCGAGATCGCCACGCTGGCGACCGAGACGGGCCTCGATATCGCCGAATATCGCCGCATCGTGCACAAGGTGCAGAAGGGCGAACGCGAAGCCGCCATCGCCAAGAAGGAGATGGTCGAGGCCAATCTGCGTCTCGTGATCTCCATCGCCAAGAAGTACACCAATCGTGGCTTGCAGTTCCTCGACCTGATCCAGGAGGGCAATATCGGGTTGATGAAGGCCGTCGATAAGTTCGAATATCGCCGCGGCTACAAGTTCTCGACCTATGCGACCTGGTGGATCCGTCAGGCGATCACCCGCTCGATCGCCGATCAGGCGCGCACCATCCGTATTCCGGTGCACATGATCGAGACGATCAACAAGATCGTACGTACGTCGCGCCAGATGTTGCACGAGATCGGGCGCGAGCCGACGCCGGAAGAGTTGTCCGAGAAGCTGCAAATGCCGCTCGACAAGGTCCGCAAGGTGCTCAAGATCGCCAAGGAGCCGATCTCGCTTGAAACCCCGATCGGTGACGAGGAAGATTCGAACCTCGGCGATTTCATCCAGGACGTGAACGCGATCCAGCCGATCGATGCGGCCATCCAGTCGAACCTGCGTGAAACCACCACGCGCGTTCTGGCCTCGCTGACCCCGCGCGAAGAGCGCGTGCTGCGCATGCGCTTCGGTATCGGCATGAACACCGACCATACGCTGGAGGAAGTCGGCCAGCAGTTCTCGGTGACGCGCGAGCGTATCCGTCAGATCGAAGCCAAGGCGCTGCAAGCTCAAGCATCCGAGCCGGAGCCGGAAGCTGCGGAGCTTCCTCGACAATTAGGAGCCGCCCATGGCGGCTTCCCGTCTCAAACTCACTTCGCTTCGCACCGCTGTTCCGTTCAAGCTGGTGGTGACGTTTTCGGACGGGACGTCGGGAACGTTCAATGCGGCGCCGATGCTGGCGGAGCGGGGCGAGGGGACGGAGCCGTTGCGGGATCGGGCGTATTTCTCGCAGGTCGAACTGGTCAATGGCAAGCCGATCTGGCCGAACTACTTTGA
PROTEIN sequence
Length: 757
MATKVANKASKDTEKPEAGAPEASNDSPLIDQNDAAVKKLIKVAKKRGYVTYEELNAVLPSDEVSSEQIEDFMSMFSEMGINVVDEDEVEETEVEKDEDDSGTEVATSAGTALASTSNTKSGSDRTDDPVRMYLREMGSVELLSREGEIAIAKRIEAGRETMIEGLCESPLTFQAIIIWRDQLAQGEILLRDIIDLEATYAGPDAKQAAPEIPVAPARPEPEPAKEKAKPAPKRASSGDDDDYVPEEPEPPQDPVEDDDDEFDNALSLSAMEAELKPQVVETFNRIAEAYGQMREMQDRHAEDRSATVSDAENERLGALRGEVIADVKSLSLNTSRIESLVEQLYDINKRLVRFEGRLLRLAESYGVKREKFLENYYGRELDPSWEWEVENFDGKGWGEFARREVDTIKEIRTEIATLATETGLDIAEYRRIVHKVQKGEREAAIAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKIVRTSRQMLHEIGREPTPEELSEKLQMPLDKVRKVLKIAKEPISLETPIGDEEDSNLGDFIQDVNAIQPIDAAIQSNLRETTTRVLASLTPREERVLRMRFGIGMNTDHTLEEVGQQFSVTRERIRQIEAKALQAQASEPEPEAAELPRQLGAAHGGFPSQTHFASHRCSVQAGGDVFGRDVGNVQCGADAGGAGRGDGAVAGSGVFLAGRTGQWQADLAELL*