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scnpilot_p_inoc_scaffold_10453_3

Organism: SCNpilot_P_inoc_Devosia_62_4

partial RP 38 / 55 BSCG 38 / 51 ASCG 9 / 38
Location: 1089..2108

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase similarity UNIPROT
DB: UniProtKB
  • Identity: 97.1
  • Coverage: 339.0
  • Bit_score: 654
  • Evalue 1.00e-184
DNA-directed RNA polymerase subunit alpha n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RC15_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 87.8
  • Coverage: 337.0
  • Bit_score: 607
  • Evalue 5.90e-171
  • rbh
DNA-directed RNA polymerase subunit alpha similarity KEGG
DB: KEGG
  • Identity: 87.8
  • Coverage: 337.0
  • Bit_score: 607
  • Evalue 1.70e-171

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Taxonomy

Devosia chinhatensis → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1020
GTGACGATCCAGAGGAACTGGCAGGAACTTATCAAGCCGACCAAACTGGAGATTGTTTCGGGCAGCGACGACGCGCGAGTGGCTTCGGTTATCGCCGAGCCGCTGGAGCGCGGCTATGGTCTTACCCTGGGCAATGCCCTGCGTCGCGTGCTGCTGTCGTCGCTTCAGGGCGCGGCAGTCACCGCAATCCAGATTGACGGCATTCTGCACGAATTCTCGTCGCTTCCGGGCGTGCGCGAAGACATCACCGACCTGGTGCTGAACGTCAAGGAAATCGCCATCAAGATGGGTGGCGAAGGCCCGAAGCGTCTGACTCTGACCCGTCAGGGTCCGGGTGCCGTTACTGCCGGCGACATCAAGGTTTCCGGTGACATCGAAGTGCTCAATCCCGAGTTGGTGATCTGCCACCTCGACGATGGCGCCGAGATCAATATCGAGTTCACCGTCAATACCGGCAAGGGCTATGTCCCGGCTGACAAGAACCGTCCTGAAGACGCCCCGATTGGCTATATTCCGGTCGATGCGCTGTTCTCGCCGGTTCGCCGCGTGAGCTACAAGGTCGATGCGACCCGTGCGGGCGAAAGCCTCGACAAGGACAAGCTGACCCTGCAGGTCGAAACCAACGGCGCGATCTCGCCTGAGGATGCCGTGGCCTATGCCGCGCGCATTCTGCAGGACCAGCTGTCGGTGTTCGTGAACTTCGAAGAGCCCAGCAAGGAAAAGGCACAGGATTCCGTGCCCGAGCTGGCCTTCAACCCGGCCCTGCTCAAGAAGGTCGACGAACTGGAGCTTTCCGTCCGTTCGGCCAACTGCCTCAAGAACGACAACATCGTTTATATCGGCGACCTTATCCAGAAGACGGAAGCCGAGATGCTGCGGACCCCGAATTTTGGCCGCAAGTCGCTCAACGAAATCAAGGAAGTCCTGGCACAGATGGGGCTTCATCTCGGGATGGACGTCAACAATTGGCCGCCCGAGAATATCGATGACCTCGCCAAGCGCTACGAAGATCACTACTGA
PROTEIN sequence
Length: 340
VTIQRNWQELIKPTKLEIVSGSDDARVASVIAEPLERGYGLTLGNALRRVLLSSLQGAAVTAIQIDGILHEFSSLPGVREDITDLVLNVKEIAIKMGGEGPKRLTLTRQGPGAVTAGDIKVSGDIEVLNPELVICHLDDGAEINIEFTVNTGKGYVPADKNRPEDAPIGYIPVDALFSPVRRVSYKVDATRAGESLDKDKLTLQVETNGAISPEDAVAYAARILQDQLSVFVNFEEPSKEKAQDSVPELAFNPALLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKSLNEIKEVLAQMGLHLGMDVNNWPPENIDDLAKRYEDHY*