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scnpilot_p_inoc_scaffold_13536_4

Organism: SCNpilot_P_inoc_Devosia_62_4

partial RP 38 / 55 BSCG 38 / 51 ASCG 9 / 38
Location: 2516..3415

Top 3 Functional Annotations

Value Algorithm Source
Binding-protein-dependent transport system inner membrane component n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CPS2_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 78.9
  • Coverage: 279.0
  • Bit_score: 451
  • Evalue 8.20e-124
  • rbh
ABC-type sugar transport system permease component {ECO:0000313|EMBL:EYR83017.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="S similarity UNIPROT
DB: UniProtKB
  • Identity: 78.9
  • Coverage: 279.0
  • Bit_score: 451
  • Evalue 1.10e-123
putative sugar ABC transporter, permease protein similarity KEGG
DB: KEGG
  • Identity: 75.4
  • Coverage: 285.0
  • Bit_score: 443
  • Evalue 4.80e-122

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 900
ATGAACAAACACGCCCCATCCCAGGATTTTACCGTTCCTGCGCTAATGTTCCTGGCGCCGGCCATTATCCTGGTCGCCACTTTCGTCGTTTATCCGATCGTCTATTCCGGCTGGCTGTCCTTCCACCAGTGGAACGGCGTCTCCACCCCGATCTTTGTCGGCCTCGGCAACTTTGCCCGGCTGGCTACTGACGCAACGTTCTGGCTGTCGCTGGGCCGCAATATCGTGGTCGCCGGCACCGCCCTGGTGCTGCAGGTGTTTGTCGGCCTCGCCATCGCCTATTGCCTGGTGCGCGTCGTTCCCTTTGTCAGCCGCTTCTTCCTGTTCTGCTATCTCGTGCCGGTGATGGTCAGCGAGATCTGCATCGGCCTGCTCTGGCGCTTTCTCTACAATCCCTATTTTGGCCTCGTGAACGGCGCCCTCAAGGCGATTGGCCTGGGCGATCTGCAGCGCGGCTGGCTGGGCGAGTCCGACACCGCCTTCCTTGCCGTCATCGTGGTGATGAGCTTCACCTATCTCGGCCTCTATGTACTGCTGTTCACTGCCGCGGTGCGCAGCGTGCCGGAATCGCTCTACGAGGCCGCCGATCTCGACGGCGCCAACCATTTCACCAAATTCTTCCGCATCACCATTCCCATGGTCTGGGACGCGGTACGGGCCAATGTGCTCTTGGCCATTATCGGCTCGCTCAAGACCTTTTCGCTGGTTTTCGTGCTTACCAATGGCGGGCCCAACCAGGCCAGCGAGGTGGTCTCCACCTATCTCTACAAGGTCGGCTTTTCGAGTTTCGAGATGGGCTATGCCGCAACCATAGGCTTTGCCCAGATGGTGCTGACGGCGCTCGCCGCTTGGATCATCTTCCGCTATCTGCGCCGCGCCAGTAGCGGTGGGGAGGACTGA
PROTEIN sequence
Length: 300
MNKHAPSQDFTVPALMFLAPAIILVATFVVYPIVYSGWLSFHQWNGVSTPIFVGLGNFARLATDATFWLSLGRNIVVAGTALVLQVFVGLAIAYCLVRVVPFVSRFFLFCYLVPVMVSEICIGLLWRFLYNPYFGLVNGALKAIGLGDLQRGWLGESDTAFLAVIVVMSFTYLGLYVLLFTAAVRSVPESLYEAADLDGANHFTKFFRITIPMVWDAVRANVLLAIIGSLKTFSLVFVLTNGGPNQASEVVSTYLYKVGFSSFEMGYAATIGFAQMVLTALAAWIIFRYLRRASSGGED*