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scnpilot_p_inoc_scaffold_533_61

Organism: SCNpilot_P_inoc_Myxococcales_68_7

near complete RP 53 / 55 MC: 4 BSCG 51 / 51 MC: 7 ASCG 14 / 38 MC: 1
Location: 63252..64532

Top 3 Functional Annotations

Value Algorithm Source
Sigma-54 dependent transcriptional regulator n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9EQP6_SORC5 similarity UNIREF
DB: UNIREF100
  • Identity: 43.8
  • Coverage: 454.0
  • Bit_score: 331
  • Evalue 1.00e-87
Sigma54 specific transcriptional regulator with PAS sensor, Fis family {ECO:0000313|EMBL:EYF00784.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; similarity UNIPROT
DB: UniProtKB
  • Identity: 45.1
  • Coverage: 428.0
  • Bit_score: 346
  • Evalue 7.40e-92
sigma-54 dependent transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 43.8
  • Coverage: 454.0
  • Bit_score: 331
  • Evalue 2.90e-88

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Taxonomy

Chondromyces apiculatus → Chondromyces → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1281
ATGAGCGCGCAAAACATGACGAAACCTGGAGAGATGGCCACCGTTCGTCGGACGCGCTTCTCGCGTCCACCGACTGCAGGCTCTGCATTCGTGATCACCGTCGTGGAGGGGCCGGACGCCGGGCTCGTCACGTCGCTCGATGCGACGGGGCCGACCCGCGCGCTGCTCGGTCAGAGCCCGGTCTGTACGATCCGCCTGACCGACCGCGAGGTCTCGCGCCGTCACGCTGCGCTCTCGGTCACGGACACGAAGCTCGTCGTCCTCGATCTCGGCTCGACGAACGGCACGACCGTGAACGGCGTGCTCATCAAAGAGGCTGCGCTCCAGGGCGGCGAGGCGATCCGTATCGGCTCGTCGGTGCTCTCGGTGAAGCGCGGTGAGGCGCGCGCGGCCGACCTCGGACAGACGGCGTCGTTCGGGCGAGTCATCGGCGAGTCCGCCGCGATGAAGCGGCTCTATCCGGCGCTCTCGCAGCTCGCGGGGAGCGACCGGCCCGCGCTCCTCGAGGGCGAGGCCGGCACGGGCAAGGAGCTCGTCGCCGAGGAGTTGCACCGCGCGAGCGGCCGCACCGACGGTCCCTTCATCACGCTCGAGTCGAGCACGATCCCCATCGCGGAGCTGAGCTCCCGCCTGTTCGGCGCCGGAGGCCTCTTCGAGCAGGCGCGCGGCGGCGTCCTCTTCATCGACGAGATCGGAGACCTCCCGCGTGACGTGCAGGCCACGCTCCGTGAGACCCTCGGGAAGGTGCGCGACGTTCGCGTCGTCGCTGCGACGCGCCGCGACCTCGATCGAGACGTCGCACAGGGCCGCTTCGACGACGATCTCTTCTTCCTCCTCGCCGCTGGTCGCATCGAGCTGCCGGCGCTCCGCGATCGTGAGGGAGACGTCACGCTCCTCGCTCGTCACTTCTGGCAGGAGCTCGCTCCGTCCACCGGCGCCGCGACCGATCTGCCCGAGGACTTCCTCCCGCGCTTCGAGCACTACCCCTGGCCGGGCAACGTGCGCGAGCTTCGCAGCGCGGTCCTCGCGCGCATGACGATGGGTGAGCTCGGTCCGACGTATCGGTCCGACGAGGCGAAGCAGCAGGGGCTCGACTTCCTCAGCGCGGTCATCGAGGAGGATCTTCCGTTCCCGACCGCGCGCGAGCGCGTCGTCTCCGAGTTCGAGCGTCGTTACGTCGAGCGCGTGCTCGCGCGCCACAACGGCAACGTCACCCAGGCGGCACGCGCGAGCGGCGTCGCGCATCGGTACTTCCAGCTCGTGAAGGCGCGCCTCAAGTGA
PROTEIN sequence
Length: 427
MSAQNMTKPGEMATVRRTRFSRPPTAGSAFVITVVEGPDAGLVTSLDATGPTRALLGQSPVCTIRLTDREVSRRHAALSVTDTKLVVLDLGSTNGTTVNGVLIKEAALQGGEAIRIGSSVLSVKRGEARAADLGQTASFGRVIGESAAMKRLYPALSQLAGSDRPALLEGEAGTGKELVAEELHRASGRTDGPFITLESSTIPIAELSSRLFGAGGLFEQARGGVLFIDEIGDLPRDVQATLRETLGKVRDVRVVAATRRDLDRDVAQGRFDDDLFFLLAAGRIELPALRDREGDVTLLARHFWQELAPSTGAATDLPEDFLPRFEHYPWPGNVRELRSAVLARMTMGELGPTYRSDEAKQQGLDFLSAVIEEDLPFPTARERVVSEFERRYVERVLARHNGNVTQAARASGVAHRYFQLVKARLK*