ggKbase home page

scnpilot_p_inoc_scaffold_542_32

Organism: SCNpilot_P_inoc_Myxococcales_68_7

near complete RP 53 / 55 MC: 4 BSCG 51 / 51 MC: 7 ASCG 14 / 38 MC: 1
Location: comp(39305..39979)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor, ECF subfamily n=1 Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1CZ69_MYXXD similarity UNIREF
DB: UNIREF100
  • Identity: 72.6
  • Coverage: 175.0
  • Bit_score: 247
  • Evalue 1.00e-62
ECF subfamily RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 72.6
  • Coverage: 175.0
  • Bit_score: 247
  • Evalue 2.90e-63
RNA polymerase sigma-70 factor, ECF subfamily {ECO:0000313|EMBL:ABF88753.1}; TaxID=246197 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococ similarity UNIPROT
DB: UniProtKB
  • Identity: 72.6
  • Coverage: 175.0
  • Bit_score: 247
  • Evalue 1.40e-62

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Myxococcus xanthus → Myxococcus → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 675
ATGACCCGGGCTCTCGCGAACCTCGTCGCGCAGAACGCGGAGCAGCTCGATACGGGGCTGCGGCGCGTGCCCTTCGTCGGTGAGGGGACCGGACCCGGCGCCCACGCTCGAAGCAGCACGGGCGGCGTGAGAGCCGACGCGGCGCCGAGGCCCCAGGCCGAGCTCGATGCGCTCATGGAGCGGCTCGCCGACGGTGACCGCTCGGTGTTCGCACGCGTCTTCGAGCTGCTCTGGGCTCCGATTCAGCGGTTCTGTTTGAGCTTGCTGAGAAACGAAGCCGACGCTGCCGACGCGGCCCAAGAAGCGATGCAGAAGATCTTCGAGCGCGCTCCGGCGGACTACGACCGCAAGCGAGCAGCGATGCCGTGGGCGATGGCGATCGCGGGATGGGAATGCAGGACGATCGCGCGTAGGCGATTCCGCCGCCGAGAGGTCGATGATTCCGCGGCCGGCGAGCTCCCGGGAGCCGACGCGGAGGAGGCGCTCGTCCAGAGCAATCTGACCCGTGCAGCGGTAGCTGCGCTCGGAGAGCTCTCCGACACGGATCGCGAGACGCTCGTCGCGACGTTCTGGGACGAAGCGGCGTCGGCGTCGGGCGCGACGTTGCGAAAGCGTCGCGAGCGCGCGCTGGACCGACTCCGGGGCGCGTTTCGGAGGCTCTATGGACTCGATTGA
PROTEIN sequence
Length: 225
MTRALANLVAQNAEQLDTGLRRVPFVGEGTGPGAHARSSTGGVRADAAPRPQAELDALMERLADGDRSVFARVFELLWAPIQRFCLSLLRNEADAADAAQEAMQKIFERAPADYDRKRAAMPWAMAIAGWECRTIARRRFRRREVDDSAAGELPGADAEEALVQSNLTRAAVAALGELSDTDRETLVATFWDEAASASGATLRKRRERALDRLRGAFRRLYGLD*