ggKbase home page

scnpilot_p_inoc_scaffold_1257_22

Organism: SCNpilot_P_inoc_Myxococcales_68_7

near complete RP 53 / 55 MC: 4 BSCG 51 / 51 MC: 7 ASCG 14 / 38 MC: 1
Location: 16606..17238

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigZ n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PR58_9DELT similarity UNIREF
DB: UNIREF100
  • Identity: 41.6
  • Coverage: 197.0
  • Bit_score: 146
  • Evalue 2.30e-32
RNA polymerase sigma factor SigZ {ECO:0000313|EMBL:KFE71354.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" sou similarity UNIPROT
DB: UniProtKB
  • Identity: 44.1
  • Coverage: 179.0
  • Bit_score: 148
  • Evalue 1.50e-32
ECF subfamily RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 42.8
  • Coverage: 187.0
  • Bit_score: 140
  • Evalue 6.10e-31

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Hyalangium minutum → Hyalangium → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 633
ATGATGGCTTCGGTCCGCTGCGCGAAAGCCGAGACGAGCGACGGCAAGCGCCCGTCGCTCGAGGCTCGGCTCGCTTCAGGCGATGACGCCTCGCATGCCCGCGTCGACGGTGCGCGGGAAGCCATCGCGCGCGAGCTCGCGGCGGACCGAGCTACCTACCTCGCCTTCATACGCAACCGCGTGCGCTCGGGAGCCGACGCCGAGGACATCCTCCAGCAGGCCCTCGTGAAGGCGACCGAGCGCGCGACGGACCTACGCGCCCCGGAGCGCACACGTGCCTGGTTCTTCCAGATCCTCCGGCGCACCCTCGCGGATCACCTCGCGCGGTGGGCCGTTCGCGAGGCGAAGCTCGATGAGCTCTCGGTCGAGCTTGCCGAGGCGACGCCGGAGGAGGTCGCGACCTGCGCGTGCAGCCTCGGACTGCTCGCGCAACTCCGCCCGGAGTACGCGGAGATGCTCCGTCGCATCGACATCGACGACGAGCCGCTGCCCGCGGCCGCCGCCGCGATGGGGATCACCACGAACAACGCGACGGTTCGCCTGCATCGCGCGCGAAAGGCGCTCCGCGAGAAGCTCCAGGACCTGTGCGGGACACAGTCGCTGCGCGCTTGCCTCGACTGCAGCTGCGGCTGA
PROTEIN sequence
Length: 211
MMASVRCAKAETSDGKRPSLEARLASGDDASHARVDGAREAIARELAADRATYLAFIRNRVRSGADAEDILQQALVKATERATDLRAPERTRAWFFQILRRTLADHLARWAVREAKLDELSVELAEATPEEVATCACSLGLLAQLRPEYAEMLRRIDIDDEPLPAAAAAMGITTNNATVRLHRARKALREKLQDLCGTQSLRACLDCSCG*