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scnpilot_p_inoc_scaffold_1181_3

Organism: SCNpilot_P_inoc_Myxococcales_68_7

near complete RP 53 / 55 MC: 4 BSCG 51 / 51 MC: 7 ASCG 14 / 38 MC: 1
Location: comp(2945..3961)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor FliA n=1 Tax=Thauera phenylacetica B4P RepID=N6ZSJ6_9RHOO similarity UNIREF
DB: UNIREF100
  • Identity: 41.4
  • Coverage: 256.0
  • Bit_score: 168
  • Evalue 9.10e-39
RNA polymerase sigma factor FliA {ECO:0000256|HAMAP-Rule:MF_00962}; RNA polymerase sigma factor for flagellar operon {ECO:0000256|HAMAP-Rule:MF_00962}; Sigma F {ECO:0000256|HAMAP-Rule:MF_00962}; Sigma similarity UNIPROT
DB: UniProtKB
  • Identity: 39.7
  • Coverage: 234.0
  • Bit_score: 170
  • Evalue 5.80e-39
RNA polymerase sigma factor for flagellar operon similarity KEGG
DB: KEGG
  • Identity: 38.8
  • Coverage: 237.0
  • Bit_score: 168
  • Evalue 2.60e-39

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Taxonomy

Pseudoxanthomonas suwonensis → Pseudoxanthomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1017
ATGACCAAGGATCTGACGACTCCCCATCTCCCACGTGAGATCGCGGTCCGCTATTTCCCGATCATCCGTCGGGCGGCGCGCCGCATGGCACGCCGACTCCCCTCACACGTATGCGTCGATGACCTCGTCGGTGCCGGGTTCGTAGGTCTCGTCAAAGCGTACCGACAGTACGACGCTGCACGCTGCGACCGTTTCGAGCCGTACGCCGAGCTTCGGATCCGCGGCGCGATGTTCGACGAGCTCCGCTCGCACGATCCACTTCCCCGCGATCTGCGCGCGATGCTTCGCAAGGCGAACATGGCCACACGGCAGCTGCAGACGCAGCTCGGCAGAGCCCCCACCGACGCCGAGGTGGCGAGCCAGCTCTCGCTACCGCTCGAGACGTATCGCCAGATCCGCGCGCTGACGGAGTTCCGTCCGATAAGCATCAATACACACGCAAATGACGACCGGGAGGCGCCGGTGGAGTTCAATGATCCGTCTGCGATCGCGGCGGACGAGGAGCTCGCGAAGGCAGACTCGAGGCGCGCGGTCGCGCAGGCCATCGAGGCACTTCCGCGACGACTTGGCCTAGTGCTGGAGCTCTACTACTGCGATGATCTGACGATGCGTCACATCGGCAGCCTGCTCGGCGTGACCGAGTCCCGCGTGTGCCAGCTTCGCGCAGAGGCTATCAAGCTCCTCCGCGCGTCCATGGGCGAGCCTCCCCGAGCGGGCGGCCTTCGTGAGCCTCGCGATGCTCGGCCCCCGCATGATGAGGCCGGCACGCGCGCTCCTCGACACCCGCCATCATGCGTCGATGCTGGCCTTCTCGAGAGTGGCCACACGAAACCCGCTTCGAAGCGCCAGCCGAGTGGCTCTACCGGGTCTGGCTCAGTTCCGGACCAACGAGAACCACTGCTTCGCCGCCGGCCCGTTGGAGAAGCGCTCATGAGCAAGCTCGAGGCCCGCCAAGCGCTTTTCGGCGCCCTCGGAGATCGCTCTGCCCTCCCCGCCGGAGACGCGGACTTCTTCTGA
PROTEIN sequence
Length: 339
MTKDLTTPHLPREIAVRYFPIIRRAARRMARRLPSHVCVDDLVGAGFVGLVKAYRQYDAARCDRFEPYAELRIRGAMFDELRSHDPLPRDLRAMLRKANMATRQLQTQLGRAPTDAEVASQLSLPLETYRQIRALTEFRPISINTHANDDREAPVEFNDPSAIAADEELAKADSRRAVAQAIEALPRRLGLVLELYYCDDLTMRHIGSLLGVTESRVCQLRAEAIKLLRASMGEPPRAGGLREPRDARPPHDEAGTRAPRHPPSCVDAGLLESGHTKPASKRQPSGSTGSGSVPDQREPLLRRRPVGEALMSKLEARQALFGALGDRSALPAGDADFF*