ggKbase home page

scnpilot_p_inoc_scaffold_1106_19

Organism: SCNpilot_P_inoc_Myxococcales_68_7

near complete RP 53 / 55 MC: 4 BSCG 51 / 51 MC: 7 ASCG 14 / 38 MC: 1
Location: 21229..21792

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor n=1 Tax=uncultured organism RepID=K7NAG6_9ZZZZ similarity UNIREF
DB: UNIREF100
  • Identity: 47.8
  • Coverage: 178.0
  • Bit_score: 152
  • Evalue 3.80e-34
RNA polymerase sigma factor RpoE {ECO:0000313|EMBL:EYF04891.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source= similarity UNIPROT
DB: UniProtKB
  • Identity: 51.7
  • Coverage: 174.0
  • Bit_score: 169
  • Evalue 4.20e-39
ECF family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 37.9
  • Coverage: 177.0
  • Bit_score: 115
  • Evalue 1.40e-23

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Chondromyces apiculatus → Chondromyces → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 564
ATGGCTCCCGCCGGGAACACCGACACGGAAGAGCTCTACCGTGAGCAACGAGCGTTCGTGTGCGGATTCGTCAGGCGCGTAGGCGGAGTCCCGGAGGACGACGTCGACGACATCGTCCAGGAAGTCTTCATCATGGCGCACCGAAAGGGGGGCTACGTGGCGGGGCAGGCACGGCCAAGCACTTGGCTCGCTCAGATCGCATTGGGGATCGTTGCCAACCGGCGGCGCTTCTGGCATCGCCGCCGCTGCATCCACGACGAGCGGGCCTTGGCCACCGCCGCGTTCGACGGCCCAGGACCATTCGAGCGCGCTGCCGCTGCCGAGACCCTCGTGCGCATGCAGCGAGCTCTGGATCAGCTGGATCTCGAGCATCGCGCGGTGTTCGTACTCTTCGAGCTCGAAGGGGAGCCCTGCAGCTCGATCGCCGAGGCGTTCGGCATTCCAGTCGGCACCGTCCACTCCCGCCTCAGCATCGCTCGCGCGCGCTTCCGCAAGGCGTTCGAGCAATCGCCTCGCGGCGTCATCGGGCGCGTGATCGCTCGCCGGGAGGTTTCCCATGGCTGA
PROTEIN sequence
Length: 188
MAPAGNTDTEELYREQRAFVCGFVRRVGGVPEDDVDDIVQEVFIMAHRKGGYVAGQARPSTWLAQIALGIVANRRRFWHRRRCIHDERALATAAFDGPGPFERAAAAETLVRMQRALDQLDLEHRAVFVLFELEGEPCSSIAEAFGIPVGTVHSRLSIARARFRKAFEQSPRGVIGRVIARREVSHG*