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scnpilot_p_inoc_scaffold_1214_5

Organism: SCNpilot_P_inoc_Myxococcales_68_7

near complete RP 53 / 55 MC: 4 BSCG 51 / 51 MC: 7 ASCG 14 / 38 MC: 1
Location: comp(3997..4548)

Top 3 Functional Annotations

Value Algorithm Source
Putative RNA polymerase sigma factor n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FAK3_SORC5 similarity UNIREF
DB: UNIREF100
  • Identity: 50.3
  • Coverage: 163.0
  • Bit_score: 157
  • Evalue 1.50e-35
RNA polymerase sigma factor RpoE {ECO:0000313|EMBL:AKF05679.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source similarity UNIPROT
DB: UniProtKB
  • Identity: 50.6
  • Coverage: 178.0
  • Bit_score: 165
  • Evalue 5.90e-38
RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 50.3
  • Coverage: 163.0
  • Bit_score: 157
  • Evalue 4.20e-36

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Taxonomy

Sandaracinus amylolyticus → Sandaracinus → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 552
ATGCCCCTCGACGAGGACGAGGACGTCGCGCGCCCGGAGGCGACTACGCCTCCGTCGTTCGACGCTGTCTACGATCAGCACGTCGACTTCGTCTGGCGTGCCCTCCGCGGGCTCGGTGTCGCGCCTCACTTCCTCGACGACGCTGTTCAGGACGTCTTCATCGTCGTCCACCGCCGTCTGCCCGCCTTCGAGGGCCGCTCGAAGGTCACGTCCTGGCTCTTCAGCATCGCCCTCCGCGTCGCGCACACCTATCGCAGGCGACAGCGGCCGACCGACGATCTCGCCGAGGTCGAGGACCACCTCCTCGACGATCGCCCCTCTCCGTTCGACGCTGCCGCTCGTACGGAGATACTCGAGCTTCTCGAGCGCATCCTCGATCTACTCGATGACAAGAAGCGCATCGTCTTCGTCCTCATGGAGCTCGAGCAGATGACGGCGGAGGAGGTCGCCGCGCTCCTCGACGCCAACATCAACACCATCTACTCGCGCCATCGACAGGCGCGCATCGAGTTCGATCGCCTCATCGCGCTCCACGCACGGGGCGCGAGGTAG
PROTEIN sequence
Length: 184
MPLDEDEDVARPEATTPPSFDAVYDQHVDFVWRALRGLGVAPHFLDDAVQDVFIVVHRRLPAFEGRSKVTSWLFSIALRVAHTYRRRQRPTDDLAEVEDHLLDDRPSPFDAAARTEILELLERILDLLDDKKRIVFVLMELEQMTAEEVAALLDANINTIYSRHRQARIEFDRLIALHARGAR*