ggKbase home page

scnpilot_p_inoc_scaffold_956_9

Organism: SCNpilot_P_inoc_Burkholderiales_68_20

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: 10822..12117

Top 3 Functional Annotations

Value Algorithm Source
NodT family efflux transporter, outer membrane factor (OMF) lipoprotein n=1 Tax=Sphingobium yanoikuyae ATCC 51230 RepID=K9CY33_SPHYA similarity UNIREF
DB: UNIREF100
  • Identity: 48.8
  • Coverage: 422.0
  • Bit_score: 390
  • Evalue 2.50e-105
NodT family efflux transporter, outer membrane factor (OMF) lipoprotein {ECO:0000313|EMBL:EZP81006.1}; Flags: Precursor;; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomo similarity UNIPROT
DB: UniProtKB
  • Identity: 48.8
  • Coverage: 422.0
  • Bit_score: 390
  • Evalue 2.60e-105
RND efflux system outer membrane lipoprotein similarity KEGG
DB: KEGG
  • Identity: 44.5
  • Coverage: 431.0
  • Bit_score: 361
  • Evalue 4.50e-97

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Novosphingobium resinovorum → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1296
ATGCCGGGTGACGAACAGGACGTGCGTGCGTGGTGGCATGTCTGGAACGACCCGGCGATGCACGCGCTGATAGACCAGGCGCTGGCCGCGAACCCCGACATCCGTACCGCGCAGGCCAACCTCGAAGCTGCCCGGGCGATGGTCACTGCGGCCGAGTCCGCGCTGTACCCAACGCTCTCCGCCAATGCGGCTGGCGTCACCGGGAAAATCGACTGGCGGGATCAGGATCCTTGGCGCGCGATGCTGCCGCCCTTGACCTCCAGCATTCCACCCCCCAGCCAAGTCAAAGGCTACGGAGCCGGTGTGTCCGCGGCTTGGGAGCCAGACGTATTCGGCGGCAACCGTGCCAACGAGCAGGCCGCCCGCGCCGCAGCCGCCATCGCAGAGGAAAGGCTGCATGGCGCGCACGTCCTGGTGGCGGCGGAGGTCGCCGGAAACTACCGCCAGGCGCTCGCGCTGCGTCAGCGCCTGGCGATCCTCGACGAGTCCATCGCCACGACCAAAGAACTGCACCGGTATGTGCAGGCCCGCTTCACGGCGGGGCATGTGAAGGCGGCCGAGGTCGCCCTCACGCGCGCCCACCTGGAAGAACAGCAGGCGGCGAGACCTTATCTTGCAGCGCTGTTTGAAACACGTCTGCGCCGGCTGGCCGTGCTGTGCGGACTGCCGCCACAACATGCGCCGGCGCTGGCGTCCGAAGCCATGCCCGTCCCGCCGCCGCCCAGCGGTCAACTGCCATCCAGCGTCCTGAATCGCCGGCCGGACGCACGTGCCGCGCTGTGGGCGGTGGAGGCTCGGGTGGCGCAGCTCAAGCGCCTCAAGGCGGATCTGCTGCCCAGCTTCGGCATCGTATTCCTGGGTGGCGATGGGCGCCTGACGTTCGATACCATTCCCGATGTCTCCGGTTTCGGAGGACTGATGGGCCTGCGCGTTTCCTTGCCCTTGTTCAATGCCGGTCGCCTGAAGGCGAATGTCCGTGCTGGCGATGCTCAATTGCAAGCCGCAGTGGCCGACTACGACAAAGCGGTATTGGCGGCACTGGAAGACGTGGAGAATGCCTATGGCATGCGCTTTGGGCTCGATGCTCGAATATCGGGGCTGGAGCGCAGCCTGGATGCGTCTCGCCACGTTGCTGAATCGAAGCGACTGCTGTTCGATGCGGGAGAAGCGACCCGTGACGAGGTTCTGAAGGCCCGGGTCGAGATCACCCGAACGGAGGATGCCTTGGCGCAGTTGCGCATGGAGCAGGCCATCGCCAGCGTGCAGCTCTATCAGGCGCTGGGTGGAGGCTGGTGA
PROTEIN sequence
Length: 432
MPGDEQDVRAWWHVWNDPAMHALIDQALAANPDIRTAQANLEAARAMVTAAESALYPTLSANAAGVTGKIDWRDQDPWRAMLPPLTSSIPPPSQVKGYGAGVSAAWEPDVFGGNRANEQAARAAAAIAEERLHGAHVLVAAEVAGNYRQALALRQRLAILDESIATTKELHRYVQARFTAGHVKAAEVALTRAHLEEQQAARPYLAALFETRLRRLAVLCGLPPQHAPALASEAMPVPPPPSGQLPSSVLNRRPDARAALWAVEARVAQLKRLKADLLPSFGIVFLGGDGRLTFDTIPDVSGFGGLMGLRVSLPLFNAGRLKANVRAGDAQLQAAVADYDKAVLAALEDVENAYGMRFGLDARISGLERSLDASRHVAESKRLLFDAGEATRDEVLKARVEITRTEDALAQLRMEQAIASVQLYQALGGGW*