ggKbase home page

scnpilot_p_inoc_scaffold_8620_1

Organism: SCNpilot_P_inoc_Thiobacillus_63_16_multi

partial RP 38 / 55 MC: 1 BSCG 35 / 51 ASCG 9 / 38 MC: 2
Location: comp(1..249)

Top 3 Functional Annotations

Value Algorithm Source
16S rRNA processing protein RimM; K02860 16S rRNA processing protein RimM id=12493277 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 98.8
  • Coverage: 83.0
  • Bit_score: 169
  • Evalue 1.70e-39
16S rRNA processing protein RimM; K02860 16S rRNA processing protein RimM Tax=GWE1_Thiobacillus_62_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 86.7
  • Coverage: 83.0
  • Bit_score: 150
  • Evalue 1.20e-33
16S rRNA-processing protein RimM similarity KEGG
DB: KEGG
  • Identity: 80.7
  • Coverage: 83.0
  • Bit_score: 143
  • Evalue 2.20e-32

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWE1_Thiobacillus_62_9_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 249
ATGGGGCGCATCGCCGCCCCGTTCGGTATCAAAGGCTGGGTCAAAGTCCAGCCCTACAGCGAAGACCCGGACGCGTTGATGGATTTTGAATCCTGGCGCGTCGGCCGTGACGGACAACAGAGGCATTACCGCGTCGAAGCCGTCCAGGACCATGGCAAAGCCCTGGTCGCCAAACTGGCCGGCATCGACGACCGCGACACGGCGTATGCCCTGCGCGGACAGGAAATCTCGGTGGCGAAGAGCGCATTA
PROTEIN sequence
Length: 83
MGRIAAPFGIKGWVKVQPYSEDPDALMDFESWRVGRDGQQRHYRVEAVQDHGKALVAKLAGIDDRDTAYALRGQEISVAKSAL