ggKbase home page

scnpilot_p_inoc_scaffold_7954_8

Organism: SCNpilot_P_inoc_Thiobacillus_63_16_multi

partial RP 38 / 55 MC: 1 BSCG 35 / 51 ASCG 9 / 38 MC: 2
Location: comp(4537..5013)

Top 3 Functional Annotations

Value Algorithm Source
GreA/GreB family elongation factor; K03624 transcription elongation factor GreA id=12492965 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 159.0
  • Bit_score: 305
  • Evalue 3.80e-80
  • rbh
GreA/GreB family elongation factor similarity KEGG
DB: KEGG
  • Identity: 91.1
  • Coverage: 158.0
  • Bit_score: 285
  • Evalue 6.80e-75
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=292415 species="Bacteria similarity UNIPROT
DB: UniProtKB
  • Identity: 91.1
  • Coverage: 158.0
  • Bit_score: 285
  • Evalue 3.40e-74

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 477
GTGAACAAATTCCCCCTCACCGTCGTCGGTGCCGAAAAGTTGCGTGTTGAACTGCAGCATCTGAAGAGCGTGGAACGGCCTGCTGTCATTCAGGCGATCGCCGAGGCCCGCGCGCAGGGCGATCTGTCGGAGAATGCCGAGTACGACGCCGCCAAGGAAAAGCAGGGGTTCATCGAAGGACGCATCGCCGATCTTGAAGGCAAGCTGGCGAATGCGCAGATCATCGATCCCGCTACCCTCGATGCGGAAGGCCGCATCGTGTTCGGTGCGACGGTCGATCTGGAAGACATCGAATCGGGCGATACCGTCACGTATCAGATTGTCGGCGACGACGAAGCCGACATCAGGCAGGGCAAGATTTCGGTCTCGTCGCCCATTGCCCGCGCACTGATCGGCAAATATGCGGGCGACAGCGTGGATGTCCAGGCGCCCGCCGGGGTGCGCCAGTACGACGTGCTGGACGTTCTGTATAAATAA
PROTEIN sequence
Length: 159
VNKFPLTVVGAEKLRVELQHLKSVERPAVIQAIAEARAQGDLSENAEYDAAKEKQGFIEGRIADLEGKLANAQIIDPATLDAEGRIVFGATVDLEDIESGDTVTYQIVGDDEADIRQGKISVSSPIARALIGKYAGDSVDVQAPAGVRQYDVLDVLYK*