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scnpilot_p_inoc_scaffold_7767_8

Organism: SCNpilot_P_inoc_Thiobacillus_63_16_multi

partial RP 38 / 55 MC: 1 BSCG 35 / 51 ASCG 9 / 38 MC: 2
Location: comp(4409..5377)

Top 3 Functional Annotations

Value Algorithm Source
ribosomal large subunit pseudouridine synthase C (EC:5.4.99.-); K06179 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] id=12493112 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 99.1
  • Coverage: 323.0
  • Bit_score: 637
  • Evalue 8.60e-180
  • rbh
ribosomal large subunit pseudouridine synthase C (EC:5.4.99.-) similarity KEGG
DB: KEGG
  • Identity: 90.7
  • Coverage: 322.0
  • Bit_score: 589
  • Evalue 4.50e-166
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenoph similarity UNIPROT
DB: UniProtKB
  • Identity: 90.7
  • Coverage: 322.0
  • Bit_score: 589
  • Evalue 2.20e-165

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Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 969
ATGAAAATGAAGGACTTAGAGAAAGATTCGGTCAGGCGCCTGAAGATCGACGACAGCGCGGACAGCCAGCGTCTCGACAACTTTCTGATGGCGCGGCTGAAAGGCGTGCCGAAAAGCCGCATCTACAAGCTGGTGCGCGGCGGCGAGGTACGCATCAACGGCGGCCGGGTCGATGTCGGTTATCGTCTGAAGCCGGGTGACGAGGTGCGCATTCCGCCGGTACGCATGGCCGTACCCGTGATCACGCCCGCCACCCATTTGCCGCAAGGCGGCATCCGCCTGCTGCCGCACGTCCTCTACCGCGATGACGCGTTGATCGCCTTGAACAAACCGGCCGGCATGGCGGTACACGGCGGCAGCGGCATTTCGCGCGGGGTGATCGAGCAGATGCGGCTGGAGCTGCCGGAATGTCGCTATATGGAACTGGTACACCGGCTCGACCGCGAGACCTCGGGCGTCCTGCTGATCGCGCTGAAGCGGCGCGCCTTGGTCGGATTGCATGCGGCGATGCGCGACGGCAAGATCGAGAAGCGCTACCTCACGCTGGTGGCCGGACGCTGGCCGAACCCGTTGCAACATGTGAGACTGTCGCTGCACAAACGCGTCACCGATGACGGCGAGAAGCGGGTGACGGTGCGCGACGAAGGCCAGACCGCGCACACGATTTTCCGCCGCCTGCAGGTCTATGCAGACTTTACCCTGCTGGAAGCGGAGCTGAAGACCGGACGCACCCATCAGATCCGCGTGCATACTTCGCACTTGGGCTTTCCGATCGCGGGAGACGACAAATACGGCGATTTCGACCTCAACAAGCGCCTGGCCAAGCAAGGCCTGAAACGCATGTTCCTGCATGCGGCCAAACTGGTATTCGATCATCCCGTCAGCGGCGAACGCCTGACGATCGAGGCGCCGTTACCGGCCGATCTGGCCATTTTTCTGGATAATTTGAAGCATGCCCAAGCAATTTGA
PROTEIN sequence
Length: 323
MKMKDLEKDSVRRLKIDDSADSQRLDNFLMARLKGVPKSRIYKLVRGGEVRINGGRVDVGYRLKPGDEVRIPPVRMAVPVITPATHLPQGGIRLLPHVLYRDDALIALNKPAGMAVHGGSGISRGVIEQMRLELPECRYMELVHRLDRETSGVLLIALKRRALVGLHAAMRDGKIEKRYLTLVAGRWPNPLQHVRLSLHKRVTDDGEKRVTVRDEGQTAHTIFRRLQVYADFTLLEAELKTGRTHQIRVHTSHLGFPIAGDDKYGDFDLNKRLAKQGLKRMFLHAAKLVFDHPVSGERLTIEAPLPADLAIFLDNLKHAQAI*