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scnpilot_p_inoc_scaffold_9909_1

Organism: SCNpilot_P_inoc_Thiobacillus_63_16_multi

partial RP 38 / 55 MC: 1 BSCG 35 / 51 ASCG 9 / 38 MC: 2
Location: 165..1424

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=292415 specie similarity UNIPROT
DB: UniProtKB
  • Identity: 97.6
  • Coverage: 419.0
  • Bit_score: 807
  • Evalue 8.80e-231
rho; transcription termination factor Rho; K03628 transcription termination factor Rho id=12495252 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 99.5
  • Coverage: 420.0
  • Bit_score: 818
  • Evalue 3.60e-234
  • rbh
rho; transcription termination factor Rho similarity KEGG
DB: KEGG
  • Identity: 97.6
  • Coverage: 419.0
  • Bit_score: 807
  • Evalue 1.80e-231

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Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1260
ATGCATCTTTCCGAACTCAAGCAGAAACCCATCACCGAGCTTCTCGAAATCGCCGCGGCCAGCGGGATCGACAACGCCAACCGTTTTCGCAAACAGGAACTGATCTTCACCATCCTGAAGACGCTGGCCAAGCGCGGCGAAAGCATCTACGGCGATGGGGTGCTGGAAGTGCTGCCGGATGGCTTCGGATTCCTGCGCTCGCCGGAGTCCTCGTATCTCGCCAACACCGACGACATCTATGTGTCGCCCTCGCAGATCCGCCGCTTCAACCTGCACACCGGCGACAAGATCGAAGGTGAGATCCGCACCCCCAAGGACGGCGAACGCTATTCGGCGATGACCAAGCTCGACCTGATCAACGGCGAGCCGCCCGAAGCCAGCAAGAACAAGATCCTGTTCGAGAACCTGACCCCGCTGCACCCGGACAAGCCGCTCAAGCTGGAGCGCGACATCAAGGCCGAGGAAAACATCACCAGCCGCGTCATCGACATCGTCGCGCCCATCGGCAAAGGCCAGCGCGGCTTGCTGGTGGCGCCGCCGAAGTCCGGCAAGACGGTGATGCTGCAGCACATCGCCCACGCCATCACCTCCAACCATCCCGACGTCGTGCTGTTCGTGCTGCTGATCGACGAGCGCCCGGAAGAAGTCACCGAGATGAGCCGCACCGTGCGTGGTGAAGTCGTGGCGTCCACCTTCGACGAACCCGCCAGCCGCCACGTCCAGGTCGCCGAAATGGTGATCGAGCGCGCCAAGCGCCTGGTCGAGCACAAGAAGGACGTGGTGATCCTGCTCGACTCGATCACCCGTCTGGCGCGTGCCTACAACACCGTGCAGCCGGCTTCCGGCAAGGTGCTCACCGGCGGCGTCGACGCCAACGCGCTGCAGAAGCCCAAGCGCTTCTTCGGTGCCGCGCGCAACATCGAGGAAGGCGGCAGCCTCACCATCCTCGCCACCACGCTGGTCGATACCGGCAGCCGCATGGACGACGTGATCTACGAGGAATTCAAGGGCACCGGCAACCTGGAAATCCACCTCGACCGCAAGATGGCCGAGAAGCGCCAGTATCCGGCGATCAACGTCAACCGTTCCGGCACCCGCCGCGAAGAACTGCTGATGCCGCACGACATCCTGCAAAAGGTATGGGTGCTGAGGAAGCTGCTCTACCCGATGGACGACATGGAAGCGATGGAGTTTCTGCTCGACAAGATCCGCGCGACGAAGAACAACAACGAGTTCTTCGATTCGATGCGTCGGGGATGA
PROTEIN sequence
Length: 420
MHLSELKQKPITELLEIAAASGIDNANRFRKQELIFTILKTLAKRGESIYGDGVLEVLPDGFGFLRSPESSYLANTDDIYVSPSQIRRFNLHTGDKIEGEIRTPKDGERYSAMTKLDLINGEPPEASKNKILFENLTPLHPDKPLKLERDIKAEENITSRVIDIVAPIGKGQRGLLVAPPKSGKTVMLQHIAHAITSNHPDVVLFVLLIDERPEEVTEMSRTVRGEVVASTFDEPASRHVQVAEMVIERAKRLVEHKKDVVILLDSITRLARAYNTVQPASGKVLTGGVDANALQKPKRFFGAARNIEEGGSLTILATTLVDTGSRMDDVIYEEFKGTGNLEIHLDRKMAEKRQYPAINVNRSGTRREELLMPHDILQKVWVLRKLLYPMDDMEAMEFLLDKIRATKNNNEFFDSMRRG*