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scnpilot_p_inoc_scaffold_665_14

Organism: SCNpilot_P_inoc_Burkholderiales_67_12

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 1
Location: comp(16505..17398)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 87.8
  • Coverage: 295.0
  • Bit_score: 523
  • Evalue 1.80e-145
Putative glycine cleavage system transcriptional activator (Gcv operon activator)(gcvA) id=12551318 bin=BDI species=Variovorax paradoxus genus=Variovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 86.8
  • Coverage: 295.0
  • Bit_score: 518
  • Evalue 4.10e-144
RSp1593; transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 61.2
  • Coverage: 291.0
  • Bit_score: 365
  • Evalue 1.30e-98

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Taxonomy

RLO_Burkholderiales_65_40 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 894
ATGAGAAAAGACATCCCCAGCCTGGGTGTGCTCCAGGCGTTCGAGGCCTCGGCGCGCTTGCTGAGCTTCTCCCGTGCAGCCGAGGAGCTGGCGCTCACGCCCAGTGCCGTGAGCCGCCATGTGGCGGCCCTGGAGGACCGCCTGGGGGTGACGCTGTTCGTGCGTGCGCGCCGCCGCCTCCTGCTGACCGATACCGGGCGCAGCTATGCGGCGCGCATCCGTCTGCACCTGGAGCAGATCGAGCGCGACACGCAGGAAATCCGCGTGGGGCGCGAGGAAGGCTATGTGCTGAACCTGGCCGTGGTCTCCACGTTCTGCACGCAGTGGCTCATCCCGCGCCTGCCGCAGTTTGCCGCGCAGCACCCGCGCATCACGCTGAACCTGTCGGTGCGCTCGGAGGCCTTTGCCTTTGACGAAAGCGGCTTCGACGCGGCCCTGTACTACGGCGACCGGCTCTGGCCCGACACCCAGGGCCGCATGGTGGTGCCCGAGGGGCCTTGCGCCCCGGTGTGCAGCCCGGCCTATGCGCAGGCGCACCGCCTGCAGGACGAGTCTGCCTGGCTGCAGTGCCCGCACCTCACGCTGGGCTCGCGCCCCAACGCCTGGCGCGACTGGTATGCCGCGCGTGGCTGGCATTACACGCTGCACGCCTCGCGCGGGCCGCGCTATGAGCTGTTCTCCATGGTCATCGCCGCTGCCGCCGTGGGCCTGGGCGTGGGCCTGGTGCCGCTGCTGCTGGCGCAGGAGGCGCTGGACAGCGGCCGCCTGGTGCTTGCCCACCCGCAGCCGCTCGCCGGTGCCCAGGGCTACTGGTGCGTGCAGCCGCAGCACCGTCCCGGCACGGAGGCCCTGCAGGCGTTCCGGGAGTGGCTGCAGGACCAGGGGGCGTCATAG
PROTEIN sequence
Length: 298
MRKDIPSLGVLQAFEASARLLSFSRAAEELALTPSAVSRHVAALEDRLGVTLFVRARRRLLLTDTGRSYAARIRLHLEQIERDTQEIRVGREEGYVLNLAVVSTFCTQWLIPRLPQFAAQHPRITLNLSVRSEAFAFDESGFDAALYYGDRLWPDTQGRMVVPEGPCAPVCSPAYAQAHRLQDESAWLQCPHLTLGSRPNAWRDWYAARGWHYTLHASRGPRYELFSMVIAAAAVGLGVGLVPLLLAQEALDSGRLVLAHPQPLAGAQGYWCVQPQHRPGTEALQAFREWLQDQGAS*