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scnpilot_p_inoc_scaffold_1161_20

Organism: SCNpilot_P_inoc_Burkholderiales_67_12

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 1
Location: comp(19247..20260)

Top 3 Functional Annotations

Value Algorithm Source
RluA family pseudouridine synthase (EC:3.2.1.17) similarity KEGG
DB: KEGG
  • Identity: 67.7
  • Coverage: 322.0
  • Bit_score: 423
  • Evalue 5.80e-116
Pseudouridine synthase n=1 Tax=Acidovorax sp. CF316 RepID=J0KM11_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 67.5
  • Coverage: 326.0
  • Bit_score: 427
  • Evalue 1.10e-116
RluA family pseudouridine synthase Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 68.8
  • Coverage: 327.0
  • Bit_score: 448
  • Evalue 1.10e-122

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Taxonomy

RLO_Burkholderiales_65_40 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1014
GTGCCAGATCCTGCCGGCGATCAGGCCGAAGACGAGGCAACGGAGGCGCCCGAGGTCGAATGGCGCAGCCTCACCATCGGCATGGCCGAGCATGGCCAGCGGCTCGATCGCGTGCTGGCGGGTGCGGTGACGGAGTTTTCCCGCAGCTACCTGCAGCAGCTCATCGACAAGGGCGCCGTGCTGCTGCACGGCACGCCGGTGACCAAGGCGGCGCACCGGGTCAAGGCGGGCGACAGCCTGCGGCTGGAACTGCGCCCCACGCAGGAGAGCCAGGCCTTTCGTCCCGAGCCCATGGCGCTGGCGGTGGTGTACGAGGACGCGCACCTGCTGGTCATCGACAAGCCCGCCGGCCTGGTCGTGCACCCGGCGCCCGGCCATTGGGGCGGCACGCTGCTCAACGGCCTGCTGGCCCACGACCCGGCCTGCACCCGCGTGCCGCGCGCGGGCATCGTGCACCGGCTGGACAAGGACACCAGCGGCCTCATGGTGGTGGCCAAGACGCGCGCCGCCATGGATGCCCTGGTCGCCATGATTGCGCAGCGCCAGGTGCAGCGCCAGTACCTGGCCTTGGCCCATGGGCCCTGGCGCGGGGAGCGGCAGTTGCGCGTGGATGCGCCCATCGGGCGCGATCCGCGCAACCGGCTGCGCATGGCCGTCGTGGACCTGGCCCTGCACGCGGGCAAGCCGGCGCGTACCGACTTCGAATTGCTGGCCAGCACCGCCCAGGCGTCCTGGGTGCGCTGCACCCTGCACACCGGCCGCACGCACCAGATCCGCGTACACATGGCGCATCACGGGCACCCGCTCGTGGCCGATACGCTGTACGGCGGGCATCCTGCCTTCGGCCTGCAGCGCCAGGCCCTGCATGCCTTCCGGCTCGCTTTTCCGCACCCCATGCGGGAACAGATGCTGGAATTCCTGGCACCCCTGCCGCCCGACCTGTGCGCGGCGCTGGCCGTCGCAGGCCTGGACGGGGCGGTGCCGGTGGGGGCGCTGCCGCCACGCCCGTCCTAG
PROTEIN sequence
Length: 338
VPDPAGDQAEDEATEAPEVEWRSLTIGMAEHGQRLDRVLAGAVTEFSRSYLQQLIDKGAVLLHGTPVTKAAHRVKAGDSLRLELRPTQESQAFRPEPMALAVVYEDAHLLVIDKPAGLVVHPAPGHWGGTLLNGLLAHDPACTRVPRAGIVHRLDKDTSGLMVVAKTRAAMDALVAMIAQRQVQRQYLALAHGPWRGERQLRVDAPIGRDPRNRLRMAVVDLALHAGKPARTDFELLASTAQASWVRCTLHTGRTHQIRVHMAHHGHPLVADTLYGGHPAFGLQRQALHAFRLAFPHPMREQMLEFLAPLPPDLCAALAVAGLDGAVPVGALPPRPS*