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scnpilot_p_inoc_scaffold_1607_5

Organism: SCNpilot_P_inoc_Burkholderiales_67_12

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 1
Location: 4973..5674

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, TetR family n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CW71_VARPS similarity UNIREF
DB: UNIREF100
  • Identity: 60.4
  • Coverage: 235.0
  • Bit_score: 278
  • Evalue 7.40e-72
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 60.4
  • Coverage: 235.0
  • Bit_score: 278
  • Evalue 2.10e-72
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ACS16769.1}; Flags: Precursor;; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax similarity UNIPROT
DB: UniProtKB
  • Identity: 60.4
  • Coverage: 235.0
  • Bit_score: 278
  • Evalue 1.00e-71

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 702
ATGTCTCCCGCCCTGGCCCGCCCCGCCCACGCTCCTGCCGCGCAGGACGACGCTGCGCGCCCGGACCGCAAGGCGGCCATCCTGCTGGCGGCGGAAAAGCTGTTTGCCCAGCATGGCTACCACGCCGTGTCCATCCGCCAGATCGCCGCCGAGGCCGGCGTGCCGCTGGCCCTGGTGGGCTACTACTACGGCGCCAAGCACGAGCTGTTCCACGCCATCTTCGCGCACTGGCGCCCGACCATCGAGCAGCGCCTGGCGCTGCTGCACGAGGCCCTGGCGGGCAGCGCCCCGCCCCCGCTGCGCCGTGTGGTGCAGGCCTTCGTGGCGCCGGTGCTGGCGCTGCGCGCGAGCGGCGAGGGCGAGTACTACGCCATGCTGGTGGCGCGCGAGCTGGCCTACCGCACGCCCGACACCGACCGCGTGCTCGCCGAGATGTTCGACCCCATGGCGCACGCCTTCATCGACGCCCTGCACCAGTTGCACCCGCACTGGCCGCGCGCGCGTGCCGCCTGGGCCTACCAGTTCGCCATGGGCGCCTTGCTGCACCACCTGGTGGACTACCGCGTCGAGCGCCTCTCGCAGGGGCAGAACCAGCCCAACGAGGCCGCGGCCGAGCCGCTGCTCATCGACTTCATCACCGCCGGCATCCAGGCCGTGCTGCCGCCCACCCCCTCACCCTTACAGGAGATCGCACCATGTTGA
PROTEIN sequence
Length: 234
MSPALARPAHAPAAQDDAARPDRKAAILLAAEKLFAQHGYHAVSIRQIAAEAGVPLALVGYYYGAKHELFHAIFAHWRPTIEQRLALLHEALAGSAPPPLRRVVQAFVAPVLALRASGEGEYYAMLVARELAYRTPDTDRVLAEMFDPMAHAFIDALHQLHPHWPRARAAWAYQFAMGALLHHLVDYRVERLSQGQNQPNEAAAEPLLIDFITAGIQAVLPPTPSPLQEIAPC*