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scnpilot_p_inoc_scaffold_174_43

Organism: SCNpilot_P_inoc_Dyadobacter_48_40

near complete RP 51 / 55 MC: 1 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 45997..47793

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacte similarity UNIPROT
DB: UniProtKB
  • Identity: 61.1
  • Coverage: 624.0
  • Bit_score: 658
  • Evalue 9.40e-186
Pseudouridine synthase n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VXU0_DYAFD similarity UNIREF
DB: UNIREF100
  • Identity: 61.1
  • Coverage: 624.0
  • Bit_score: 658
  • Evalue 6.70e-186
  • rbh
pseudouridine synthase similarity KEGG
DB: KEGG
  • Identity: 61.1
  • Coverage: 624.0
  • Bit_score: 658
  • Evalue 1.90e-186

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Taxonomy

Dyadobacter fermentans → Dyadobacter → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1797
ATGAGAAACAGAAACAATCCCAAAGGCTCCCAGGGCGGAGGCGGATCCTTCAAACGTGCGAAACCAGCGGTAGAGAGCCGGTTTAGCAAGCCCAGCATTAAAAAATCCAGTCTGAAATTTTCCGGTTCTGCCGACAACAAAGGCCAGAAATCACGCCCAAGCTTCGATCACGAGAAGCCACGGGAGGATCGTGGAGGATTTGACAAGACGGGCTTTGGTAAGCCGCGTTTTGACAAGCCTGATTTCAAGAAATACGGCGCTGGTAGTGACCGCCCTTTCCGCCGCGAAGGTGACTCGGCCGGTTTTAAAAAGGATTTTGGTAAAAAAGACTTCCGTCCCAACGACCGCGGCAGCGACCTGCGCGGAAGCGACCTGCGCGGCGGCGACCTGCGCGGCGGCGACAGAAAGCCGTTCGGTGACCGTCCTGAAAGATCGGGATCCGGCAGCGGAGACCGTAACCGCGAGTTCAAGCCCCGTTTTGACCGCGACAACGACGAGCGCGAGTTCCGCCCGCGCCCGGACCGCGATTCCCGCGATTTTAAATCACGTCCTGAAAGAGGTAATGGTGATCGTGAATTCAAACCACGATTCGACCGCGATAATGGTGGCGATCGTGAATCCAAGCCAAGATTCGACCGTGATAACGGCGGCGAACGCGAGTTCAAACCACGATTCGACCGCGATAATGGCGGTGATCGAGAATTTAAACCGAGATTCGACCGTGACAATGGTGGTGACCGTGAGTTCAAACCACGATCCGACCGAAATAATGGCGGTGAGCGTGAATTCAAGCCGCGTTCCGACAGGGACAATGGCGATTTTAAACCGCGTGGCGAACGTAGCGAACGCTCAGGTCAGTCAAGATCCGAAAGGCCGGCGCGCTCATTCGACCGTAACGAAGGCTCTTTTAAAAAAAAAGACGATAGAGAGGACAAACCCTACCGTTCCCGGTTCCAGGACGACCAAGAACAGGACCGCAGCGGGTTGGAGAGACGAGTAGGACGGTACGAAACCGCACCGCGCTATAATCTCGACAGCTACGAGCACAAGAAAAAGCCCTCAGCAAGACATAAGGATAAGGAAGAAACGGACGAGATCCGTCTCAACCGCTACATCGCGAATGCGGGCATTTGCTCACGCCGCGAGGCCGACGACCTGATTTCTTCCGGCCAGATTTCGGTAAATGGCAAGACCATCACCGAAATGGGCTACAAAGTGCGCGCTACCGACGTGGTGAAATACGGCAAGAAGGCATTGAACCCGGAAAAGATGGTGTATATCCTGATCAACAAGCCGAAGGATTACATTACCACCACCGACGATCCCGAAGAGCGCAAGACCGTGCTCGACCTCATCGCCGGCGCCTGCTCCGAGCGCGTGTACCCCGTAGGCCGCCTCGACCGTAATACGACCGGTTTGCTGCTGCTGACCAACGATGGTGAACTGGCTGAAAAGCTAACGCATCCATCGAGCGGTATCAAGAAGATTTACCAGGCTGAGTTGGATAAACCGATTGCAACCGAGGATTTCGAGCAATTGCGAGCGGGTGTTGAGTTGGAAGATGGTTTTATTCGCCCGGACGAGGTAGGATTGGTTACGCCGGATGCGCAGGTGGTAGGCCTGGAAATCCACAGCGGCCGCAACCGCATTGTTCGCAGGATGTTCGAGCATTTGGGCTATGAAGTTCAGAAACTCGATCGCACCGTCTTCGCTGGTTTGAACAAGAAGGATCTGCCCCGAGGCAAATGGCGCTTCCTGACAGAGAAAGAAGTGATTAAATTGAAATTCCTGCTTTAA
PROTEIN sequence
Length: 599
MRNRNNPKGSQGGGGSFKRAKPAVESRFSKPSIKKSSLKFSGSADNKGQKSRPSFDHEKPREDRGGFDKTGFGKPRFDKPDFKKYGAGSDRPFRREGDSAGFKKDFGKKDFRPNDRGSDLRGSDLRGGDLRGGDRKPFGDRPERSGSGSGDRNREFKPRFDRDNDEREFRPRPDRDSRDFKSRPERGNGDREFKPRFDRDNGGDRESKPRFDRDNGGEREFKPRFDRDNGGDREFKPRFDRDNGGDREFKPRSDRNNGGEREFKPRSDRDNGDFKPRGERSERSGQSRSERPARSFDRNEGSFKKKDDREDKPYRSRFQDDQEQDRSGLERRVGRYETAPRYNLDSYEHKKKPSARHKDKEETDEIRLNRYIANAGICSRREADDLISSGQISVNGKTITEMGYKVRATDVVKYGKKALNPEKMVYILINKPKDYITTTDDPEERKTVLDLIAGACSERVYPVGRLDRNTTGLLLLTNDGELAEKLTHPSSGIKKIYQAELDKPIATEDFEQLRAGVELEDGFIRPDEVGLVTPDAQVVGLEIHSGRNRIVRRMFEHLGYEVQKLDRTVFAGLNKKDLPRGKWRFLTEKEVIKLKFLL*