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scnpilot_p_inoc_scaffold_190_172

Organism: SCNpilot_P_inoc_Stenotrophomonas_69_27

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 1
Location: 196578..197276

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily id=2862880 bin=GWF1_Xanthomonadales_69_6 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 58.5
  • Coverage: 183.0
  • Bit_score: 204
  • Evalue 1.00e-49
ECF subfamily RNA polymerase sigma-24 factor Tax=GWF1_Xanthomonadales_69_6_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 58.2
  • Coverage: 182.0
  • Bit_score: 204
  • Evalue 1.40e-49
DNA-directed RNA polymerase specialized sigma subunit sigma24-like protein similarity KEGG
DB: KEGG
  • Identity: 45.6
  • Coverage: 180.0
  • Bit_score: 155
  • Evalue 2.60e-35

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Taxonomy

GWF1_Xanthomonadales_69_6_curated → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 699
ATGATCAGGCAGAGGTCCCGCACCTCCGGGGCCTGTGTTTTCTTGCAAGGGGCGGTGCACGGTTTCTGTGAACTGCGGCAGCTCGCAGCGGCACGGGCCGGCCCTACCATGGAGTTCGTCAGGTTTCACGGCAGCATTGGGGGACGCTTGGGTACCCAGATCACGCAACTCCTGCATCGCTGGCAGGGAGGCGACGCGCAGGCGCGGGAGCAGTTGTTCGAAGCCCTGTATTCGGACCTGATGCTGGTCGCCCGCAACCGCCTGTTCAACGATACCGGCGGCACCCTGCAGCCGGCGGCGCTGGTCAACGAATCGCTGCTGCGCCTGCTGGGTTCGGAAGTGGATTTCAAGGACCGCGCCCATTTCATCGCGGTGGCGGCGCTGAAGATGCGCTCGGTCCTGGTGGACCACCTGCGCGCGCGGGCCGCGGACAAGCGCGGCGGCAACCTCGTCCAGTTGACCCTGTCCCACGCCAGCGACGTTCCCGACGACGACGGCGATGCCTACGACGTGATGGCGCTGCACCAAGCACTGAGCCAGCTGGCCGAACTCGAGCCGCGCGCGGCGAGCATGGTCGAGCTGACCTATTTCGGCGGCATGAGCCGCGATGAGATCGCCATGGTGATGGGGGTTTCGGCACCCACCGTGGACCGCGACCTGCGTTTCGCCAGGGCCTGGCTCAACCGACAGCTGGCCTGA
PROTEIN sequence
Length: 233
MIRQRSRTSGACVFLQGAVHGFCELRQLAAARAGPTMEFVRFHGSIGGRLGTQITQLLHRWQGGDAQAREQLFEALYSDLMLVARNRLFNDTGGTLQPAALVNESLLRLLGSEVDFKDRAHFIAVAALKMRSVLVDHLRARAADKRGGNLVQLTLSHASDVPDDDGDAYDVMALHQALSQLAELEPRAASMVELTYFGGMSRDEIAMVMGVSAPTVDRDLRFARAWLNRQLA*