ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

scnpilot_p_inoc_scaffold_394_78

Organism: SCNpilot_P_inoc_Stenotrophomonas_69_27

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 1
Location: 92251..93255

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_0100 similarity UNIPROT
DB: UniProtKB
  • Identity: 88.8
  • Coverage: 322.0
  • Bit_score: 561
  • Evalue 6.70e-157
mraW; rRNA small subunit methyltransferase H (EC:2.1.1.199) similarity KEGG
DB: KEGG
  • Identity: 86.5
  • Coverage: 327.0
  • Bit_score: 554
  • Evalue 1.60e-155
16S rRNA methyltransferase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000304D825 similarity UNIREF
DB: UNIREF100
  • Identity: 88.8
  • Coverage: 322.0
  • Bit_score: 562
  • Evalue 2.80e-157
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Stenotrophomonas rhizophila → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1005
GTGAGCCGGGGTGCCCGGGTGCGCGGTCAAGCGCAGGCCGGTCACCCTCCGGTGTCGCAGCCGCCGGCGGCTCACCTGCCGGTGCTGTACACCCAGGTCCTGCAGGGCCTGAGGGTGATCGAGGACGGTACCTATCTGGACGGCACGTTCGGCCGTGGCGGCCACGCCGGCGGCGTGCTGCGCCAGCTCGGTCCCCATGGCCGCCTGCTGGTGATGGACAAGGATCCGGAGGCCATTGCCGTGGCCGAGCGCGATTTCGCGCCGGACCCGCGCGTGGCGATCCATCGCGGCAGCTTCGCCGACCTGCTGGACTGGAGCGAGACCGCCTCCGGGCTGGACGGCGTGCTGTTCGATCTGGGCGTGTCCTCGCCGCAGCTGGACGTGGCCGAGCGCGGTTTCAGCTTCGGCAAGGACGGCCCGCTGGACATGCGCATGGACCCGGATTCGGGCGAGAGCGCGGCGCAGTGGCTCAACCGCGCCGAGGAGCGCGAGATCGCCGACGTGCTGTGGACCTACGGCGAGGAGCGGCAGAGCCGCCGCATCGCCCGCGCGATCATCCAGTACCGCACCGCCAGGCAGCCGTTTTCGCGTACCGCCGAACTGGCCGAGCTGATCGCCTCGGTGATGCCGCGCGGCAAGGACAAGATCCACCCGGCCACGCGCAGCTTCCAGGCCATCCGCATCCACATCAACCGCGAACTGGCCGACCTCGAGGCCGGGCTGGACGCGGCGATGGCGCGGCTCAAGCCCGGTGGCCGGCTGGCGGTGATCAGCTTCCATTCGCTGGAAGACCGCATCGTCAAGCAGTTCATGAACCGCTATGCCAAGGCGCCGCCGAGCAACCGCCGGCTGCCGGAAGTGCAGGCCTTCGTGCCGACGCTGGACCTGGTCGGTGGCGCCATCAAGGCCGAGGACGACGAGCTGGCGGCCAACCCGCGTTCGCGCAGCGCGGTGCTGCGGGTGGCGGAAAAGCGCGCGCCGGCCACCGGGGGAGGCGCCGCATGA
PROTEIN sequence
Length: 335
VSRGARVRGQAQAGHPPVSQPPAAHLPVLYTQVLQGLRVIEDGTYLDGTFGRGGHAGGVLRQLGPHGRLLVMDKDPEAIAVAERDFAPDPRVAIHRGSFADLLDWSETASGLDGVLFDLGVSSPQLDVAERGFSFGKDGPLDMRMDPDSGESAAQWLNRAEEREIADVLWTYGEERQSRRIARAIIQYRTARQPFSRTAELAELIASVMPRGKDKIHPATRSFQAIRIHINRELADLEAGLDAAMARLKPGGRLAVISFHSLEDRIVKQFMNRYAKAPPSNRRLPEVQAFVPTLDLVGGAIKAEDDELAANPRSRSAVLRVAEKRAPATGGGAA*