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scnpilot_p_inoc_scaffold_485_90

Organism: SCNpilot_P_inoc_Stenotrophomonas_69_27

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 1
Location: 95673..97049

Top 3 Functional Annotations

Value Algorithm Source
RNA helicase n=1 Tax=Xanthomonadaceae RepID=UPI00029A264E similarity UNIREF
DB: UNIREF100
  • Identity: 83.6
  • Coverage: 458.0
  • Bit_score: 759
  • Evalue 1.60e-216
  • rbh
ATP-dependent RNA helicase DbpA {ECO:0000313|EMBL:EZP43076.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Sten similarity UNIPROT
DB: UniProtKB
  • Identity: 83.0
  • Coverage: 458.0
  • Bit_score: 759
  • Evalue 2.30e-216
dbpA; ATP-dependent RNA helicase DbpA similarity KEGG
DB: KEGG
  • Identity: 83.4
  • Coverage: 458.0
  • Bit_score: 758
  • Evalue 1.30e-216

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Taxonomy

Stenotrophomonas sp. RIT309 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1377
ATGACCGATTTTTCCTCGTTGCCGCTGATCCCGGCCCTCGCACCCGGCATCGACGCGCTGGGCTACACCACCATGACGCCGGTGCAGGCGCTGGGCCTGCCGCCGATCCTGGAGGGACGCGACGTGATCGCCCAGGCCCCCACCGGCAGCGGCAAGACCGCCGCCTTCGGCCTGGGCCTGCTGAACCGGCTCGACCCGGCCACCATCCGTACCCAGGCGCTGGTGCTGTGCCCTACCCGCGAACTGGCCGACCAGGTCGGCAGGCAGCTGCGCAAACTGGCCACCGGCATCCCCAACCTCAAGCTGCTGGTACTGACCGGCGGCGTGCCGCTGGGCCCGCAGCTGGCCTCGCTGGAGGCGCACGACCCGCAGGTGGTGGTGGGCACGCCCGGCCGCGTGCAGGAACTGGCGCGCAAGCGCGCGCTCAACCTCGGCCAGGTGCGCAGCTTCGTCCTCGACGAGGCCGACCGCATGCTCGACATGGGCTTCGAGGAGCCCATCCGCGAGATCGCCGGGCGCACCCACAAGGAGCGGCAGAGCCTGCTGTTCTCGGCCACGTTCCCCGATGCCATCCGCGAACTGGCGCGCGCCCTGCTCAATGACCCGGTGGAAGTCACCATCGACGGCCAGCAGGAAGCCCCGGCGATCCAGCACCTGTTCTTCGAGGTCGAGCCGGCGCACCGGCAGAAGGCGCTCGCCGGGCTGCTGCTCAGGTACACGCCCGAATCGGCCGTGGTGTTCTGCAACACCCGCAAGGACGTGGACGAGGTGGCCAATTCGCTGCGCCAGTTCGGCTTCTCGGCGCTGGCCCTGCATGGCGACATGGAACAGCGCGACCGCGACGAGGTCCTGCTGCAGTTCGCCAACCGCAGCTGCAACGTACTGGTCGCCAGCGACGTGGCCGCGCGCGGCCTGGACGTGGAAGACCTGGCCGCGGTGGTCAACTACGAGATGCCCAGCGACCTGGACACCTACCGCCACCGCGTCGGCCGCACCGCCCGCGCCGGCCGCCGCGGCCTGGCGCTGAGCCTGGTCGCCGGCCGCGAGCGCCACCGCGCCGATGCGCTGGAAACCGACCAGGGCACCGCCCTGGACTGGCAGAAGACCCCGCTGGCCACCGCGCGCCCGGCACAGCTGCCGCAGGCGGCGATGACCACGCTGCGGATCGATGGCGGCAAGACCGACAAGCTGCGCGCCGGCGACATCCTCGGCGCGCTCACCGGTGATGCCGGGTTGTCGGCCAAGGCCATCGGCAAGATCGACATCTTCCCCACCCGCTCCTACGTGGCCATCGCCCGCGAGCAGGCCGGCAAGGCGATCGCGCGGCTGGAAGCCGGCAGGATCAAGGGCAAGCGCTTCCGCGTGCGCAGGATGTGA
PROTEIN sequence
Length: 459
MTDFSSLPLIPALAPGIDALGYTTMTPVQALGLPPILEGRDVIAQAPTGSGKTAAFGLGLLNRLDPATIRTQALVLCPTRELADQVGRQLRKLATGIPNLKLLVLTGGVPLGPQLASLEAHDPQVVVGTPGRVQELARKRALNLGQVRSFVLDEADRMLDMGFEEPIREIAGRTHKERQSLLFSATFPDAIRELARALLNDPVEVTIDGQQEAPAIQHLFFEVEPAHRQKALAGLLLRYTPESAVVFCNTRKDVDEVANSLRQFGFSALALHGDMEQRDRDEVLLQFANRSCNVLVASDVAARGLDVEDLAAVVNYEMPSDLDTYRHRVGRTARAGRRGLALSLVAGRERHRADALETDQGTALDWQKTPLATARPAQLPQAAMTTLRIDGGKTDKLRAGDILGALTGDAGLSAKAIGKIDIFPTRSYVAIAREQAGKAIARLEAGRIKGKRFRVRRM*