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scnpilot_p_inoc_scaffold_639_58

Organism: SCNpilot_P_inoc_Stenotrophomonas_69_27

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 1
Location: 59656..61068

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-54 factor n=1 Tax=Stenotrophomonas maltophilia MF89 RepID=T5L7C1_STEMA similarity UNIREF
DB: UNIREF100
  • Identity: 74.9
  • Coverage: 471.0
  • Bit_score: 673
  • Evalue 1.60e-190
  • rbh
RNA polymerase sigma-54 factor {ECO:0000256|PIRNR:PIRNR000774}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Ste similarity UNIPROT
DB: UniProtKB
  • Identity: 74.7
  • Coverage: 471.0
  • Bit_score: 675
  • Evalue 5.90e-191
RNA polymerase sigma-54 subunit RpoN similarity KEGG
DB: KEGG
  • Identity: 74.5
  • Coverage: 471.0
  • Bit_score: 670
  • Evalue 3.80e-190

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Taxonomy

Stenotrophomonas sp. RIT309 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1413
ATGAAAGCCACGCTCGCCACCCAGCTCGGGCAGCAGCTCCACCTCACGCCCGCCCTGCTGCAGTCCATCCGCCTGCTGCAGCTCAATGGCCTGCAGCTGGAGCAGGAGATCCGCCAGGTGCTGGAGAACAACCCGCTGCTGGAGATCGAGGAGGACGCCGCCCCCGGCGTGGCCGAAGCCGCCGCCGACGGCGACCCGCAGCTGGAGACCGCGGCGTTCGACGAACTGCCGGAGAGCTCGATGTGGGACGTGGCCGGCGCCAGCTGGAACGACGCCGACGAGGACCGTACCTCGCGCCTGGCGATGGGCGAGTCCAGCGACCCGCACCTGCGCATCCTGCAGGCGCTGTCGCTGGACCTGGACGAGGGCGACCTGGCGATCGCCGCGTTCTGGCTGGAGCATTGCGACGACGCCGGCTACCTGCAGGCGCCGCTGCCGCAGCTGACCCTGCTGGCCAGCGCCCGCTTCGACCGCGACGGCGCGCACGTGGAGCGCATCCGCCAGCGCCTGCTGCAGGGCGAGCCGGCCGGCATGGCCGCGCGCGACCTGCGCGAATGCCTGCAGGCGCAGCTGGCCGCCCTGCCCGGCACGGTGCCCGCCCGGCACCTGGCGGCACGGCTGCTGGGCGAGGACCTGCAACTGCTCGCCAGCCACGACTACGCCGCCATCGCCGGCCAGCTCGATGCCGAACAGGCCGACGTGCTCGAGGCGTTCCGGCTGGTCCTGTCGCTGCAGCCGCGCCCCGGCGACACGCTGCAGGCGCAGGCCGACGCGGCGGTCATCCCGGAAGTGGTGGCCTGGCGCGCCGACGGCCAGTGGCGGGTGGCGCTGAACCCGGCCACCACGCCGCGCGTGAGCCTCAACCCGGCCTACGAGCGCGCCCTGGGCGCCAGCGAAGGCAGCGCCACCCAGCCGATGCGCGAGATGCTGCAGGAGGCGCGCTGGTTCACCCGCGGCCTGTCCATGCGCTACGACACCCTGCTGCGCACCGCGCGGGTCATCGTCGAACGCCAGGCCGCGTTCCTGGCCGAGGGCGAGGAAGCCATGGCGCCGCTGACGCTGAAGGAAGTGGCCGATGCCATCGGCATGCACGAGTCCACCGTCTCGCGCATCACCTCCGGCAAGTTCATGCAGACCCCGCGCGGCACCTTCGAGCTGAAGCACTTCTTCGCCGTGCGCCTGGACGGCGCCAGCATCTCCGGGCAGGCGGTCAAGGCGATGGTGCGGCGGCTGATCGAATCCGAGCCGCCGGCGCGCCCGCTTGCCGACGAGGCCATCGCCGAGCTGCTGTCGCGGCAGGGGGTCAACATCGCCCGCCGCACCGTGGCCAAGTACCGCGAACAGCTGGACATCGCCCCGGCGCGCGAGCGGAAACGGCACAATGCGCGTCCGTTGCTGGCCCGCGCAGGCTGA
PROTEIN sequence
Length: 471
MKATLATQLGQQLHLTPALLQSIRLLQLNGLQLEQEIRQVLENNPLLEIEEDAAPGVAEAAADGDPQLETAAFDELPESSMWDVAGASWNDADEDRTSRLAMGESSDPHLRILQALSLDLDEGDLAIAAFWLEHCDDAGYLQAPLPQLTLLASARFDRDGAHVERIRQRLLQGEPAGMAARDLRECLQAQLAALPGTVPARHLAARLLGEDLQLLASHDYAAIAGQLDAEQADVLEAFRLVLSLQPRPGDTLQAQADAAVIPEVVAWRADGQWRVALNPATTPRVSLNPAYERALGASEGSATQPMREMLQEARWFTRGLSMRYDTLLRTARVIVERQAAFLAEGEEAMAPLTLKEVADAIGMHESTVSRITSGKFMQTPRGTFELKHFFAVRLDGASISGQAVKAMVRRLIESEPPARPLADEAIAELLSRQGVNIARRTVAKYREQLDIAPARERKRHNARPLLARAG*