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scnpilot_p_inoc_scaffold_6235_5

Organism: SCNpilot_P_inoc_Stenotrophomonas_69_27

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 1
Location: comp(1878..2528)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L3 n=1 Tax=Xanthomonas vesicatoria ATCC 35937 RepID=F0BES2_9XANT similarity UNIREF
DB: UNIREF100
  • Identity: 94.4
  • Coverage: 216.0
  • Bit_score: 413
  • Evalue 1.00e-112
  • rbh
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Sten similarity UNIPROT
DB: UniProtKB
  • Identity: 96.3
  • Coverage: 216.0
  • Bit_score: 414
  • Evalue 8.60e-113
rplC; 50S ribosomal protein L3 similarity KEGG
DB: KEGG
  • Identity: 95.8
  • Coverage: 216.0
  • Bit_score: 412
  • Evalue 6.50e-113

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Taxonomy

Stenotrophomonas sp. RIT309 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 651
ATGACGAAGAAGTATTCGTTGGGCTTCGTGGGCCGCAAGGCCGGCATGAGCCGCGTTTTCACCGAGGACGGCCAGTCCATCCCGGTGACCCTGATCGAAGCCACCCCGAACCGCATCGCGCAGGTCAAGACCGTCGAAACCGACGGCTACAGCGCCGTGCAGGTGACCGTCGGCGCCCGTCGCGCCGCCCTGGTGAACAAGCCGGAAGCCGGCCACTTCGCCAAGGCCAAGGTCGAAGCCGGCCGTGGCCTGTGGGAATTCCGCGTCGAGGACGCCCAGGTCGGCGATTACGCCGTCGGTGGCGAAGTCAAGGCGGACATCTTTGCCGTTGGCCAGAAGGTCGACGTCCAGGGTGTCACCAAGGGCAAGGGCTTCCAGGGCACCATCAAGCGCTACAACTTCACCATGGGCGACGCCACCCACGGTAACTCGCTGTCGCATCGCGCGCCGGGTTCGTTGGGCCAGCGCCAGACCCCGGGTCGCGTTTTCCCGGGCAAGAAGATGGCCGGCCACATGGGTGCCGTGCAGCAGAGCACGCAGAACCTGGAAGTGGTCAAGGTCGACGTCGAGCGTGGTCTGATTGCCGTCCGTGGTGCCGTTCCGGGTGCTGCCGGTGGCGACGTGATCGTGCGTCCGGCGAGCAAGGCATAA
PROTEIN sequence
Length: 217
MTKKYSLGFVGRKAGMSRVFTEDGQSIPVTLIEATPNRIAQVKTVETDGYSAVQVTVGARRAALVNKPEAGHFAKAKVEAGRGLWEFRVEDAQVGDYAVGGEVKADIFAVGQKVDVQGVTKGKGFQGTIKRYNFTMGDATHGNSLSHRAPGSLGQRQTPGRVFPGKKMAGHMGAVQQSTQNLEVVKVDVERGLIAVRGAVPGAAGGDVIVRPASKA*