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scnpilot_p_inoc_scaffold_822_3

Organism: SCNpilot_P_inoc_Microbacterium_67_17

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 ASCG 11 / 38
Location: comp(1823..2059)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; T similarity UNIPROT
DB: UniProtKB
  • Identity: 57.1
  • Coverage: 77.0
  • Bit_score: 86
  • Evalue 2.50e-14
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00037EA0C9 similarity UNIREF
DB: UNIREF100
  • Identity: 76.9
  • Coverage: 78.0
  • Bit_score: 117
  • Evalue 7.30e-24
twitching motility protein PilT similarity KEGG
DB: KEGG
  • Identity: 49.4
  • Coverage: 79.0
  • Bit_score: 68
  • Evalue 1.10e-09

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Taxonomy

Microbacterium mangrovi → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 237
GTGCTCGCATCTCTCGCGAGCCTGACAGCGAGAGCTGATCACGTCTTCCTCGCCGACTCGGTCAGTCTTCTCGACTCTTCCATCCATACCGAGCGACTGCTCGCGAACTCGCAGGTCACCGACACCTACCTGCTGCCCCTGGCGTCGTCGCATGACGCTCTCCTGGCAACCTTCGACACCCGCCTCGTGACAGCAGCTGTGCCGGGCGGCAAGGCAGTGCTGTTCCCGATACCCTGA
PROTEIN sequence
Length: 79
VLASLASLTARADHVFLADSVSLLDSSIHTERLLANSQVTDTYLLPLASSHDALLATFDTRLVTAAVPGGKAVLFPIP*