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scnpilot_p_inoc_scaffold_10116_6

Organism: SCNpilot_P_inoc_Microbacterium_67_17

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 ASCG 11 / 38
Location: comp(3824..4603)

Top 3 Functional Annotations

Value Algorithm Source
Putative spermidine/putrescine ABC transporter, permease protein PotB n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RMP3_LEIAQ similarity UNIREF
DB: UNIREF100
  • Identity: 68.5
  • Coverage: 238.0
  • Bit_score: 337
  • Evalue 8.70e-90
Spermidine/putrescine transport system permease protein PotB {ECO:0000313|EMBL:KJL35630.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source=" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.6
  • Coverage: 257.0
  • Bit_score: 402
  • Evalue 4.00e-109
ABC-type spermidine/putrescine transport system, permease component I similarity KEGG
DB: KEGG
  • Identity: 57.9
  • Coverage: 266.0
  • Bit_score: 311
  • Evalue 2.50e-82

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Taxonomy

Microbacterium ginsengisoli → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 780
ATGGTCTCCATGATGTTCTCCTTCGAGGTGAACCCCACTCACACAGACCATCTGACACCCCCGTTCAACTGGCAGAACTATGTCGACGTGATCGCGGAGTACTGGCCACAGTTCCTGCGCTCGTTCTGGTACGCGCTGTTGGCTACCCTCTTCGCGCTGCTGATCAGCTATCCGATCGCGTACTTCATCGGTGTGGTCCTGCGCGACAGACCCCTCATCCGCAACCTGCTGCTGGTGCTGGTGATCGCGCCGTTCTTCATCTCGTTCCTCCTGCGGACCCTCGCCTGGAAGGCACTGTTCGCCGACGAAGGGCCGGTCGTCGGGTTCCTGCAGACGATCGGACTCTTCGGACCGCAAGATCACATCACGGGCACGGGATTCGCCGTCGTCTTCGGTCTGACCTACAACTTCATCCCGTTCATGACGCTGCCGCTGTTCGCCTCGCTCGACCGGCTCGACACGCGCCTGCTCGAGGCGAGCTCCGACCTGTATGCGACACCAGGGCAGACGTTCTGGCGGGTCACGTTCCCCCTGTCGCTCCCGGGCGTCGTCTCGGGGACGCTGCTGACCTTCATCCCGGCAACCGGTGACTACGTCAACGCCAGCCAGGCCTTCCTCGGAAGCCCGTCGACCACGATGATCGGAAACGTCATCCAGTCGAAGTTCCTCATCACGGTGAACTACCCGCAGGCGGCAGCCCTCAGCATCCTGCTGATGGCCGTCATCCTGATCATTGTCGGCAGCTACGTGCGGCGCACGGGAACGGATGACCTCCTGTGA
PROTEIN sequence
Length: 260
MVSMMFSFEVNPTHTDHLTPPFNWQNYVDVIAEYWPQFLRSFWYALLATLFALLISYPIAYFIGVVLRDRPLIRNLLLVLVIAPFFISFLLRTLAWKALFADEGPVVGFLQTIGLFGPQDHITGTGFAVVFGLTYNFIPFMTLPLFASLDRLDTRLLEASSDLYATPGQTFWRVTFPLSLPGVVSGTLLTFIPATGDYVNASQAFLGSPSTTMIGNVIQSKFLITVNYPQAAALSILLMAVILIIVGSYVRRTGTDDLL*