ggKbase home page

scnpilot_p_inoc_scaffold_33

Search features with annotation key words

Displaying items 61-90 of 303 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_33_61
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

77047..77511
DNA (465bp) protein (155aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000381B690
putative membrane protein
Putative membrane protein {ECO:0000313|EMBL:CEA15765.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porp
scnpilot_p_inoc_scaffold_33_62
Chryseobacterium sp. StRB126, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

77508..78266
DNA (759bp) protein (253aa)
Methionine import ATP-binding protein MetN {ECO:0000256|HAMAP-Rule:MF_01719}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01719};; TaxID=878220 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteri
Putative D-methionine ABC transporter, ATP-binding protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W7R0_9FLAO
metN; D-methionine ABC superfamily ATP binding cassette transporter
scnpilot_p_inoc_scaffold_33_63
Elizabethkingia anophelis, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

78263..78547
DNA (285bp) protein (95aa)
Methionine import ATP-binding protein MetN {ECO:0000256|HAMAP-Rule:MF_01719}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01719};; TaxID=1117645 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacter
DL-methionine transporter ATP-binding subunit n=2 Tax=Elizabethkingia anophelis RepID=H0KNX9_9FLAO
Methionine ABC transporter ATP-binding protein
scnpilot_p_inoc_scaffold_33_64
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

78540..79193
DNA (654bp) protein (218aa)
ABC transporter, permease protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W7Q9_9FLAO
ABC transporter, permease protein {ECO:0000313|EMBL:EFK33573.1}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseo
metI; ABC superfamily ATP binding cassette transporter
scnpilot_p_inoc_scaffold_33_65
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

79217..80017
DNA (801bp) protein (267aa)
Lipoprotein n=1 Tax=Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535 RepID=R9CPC6_ELIME
Lipoprotein {ECO:0000256|PIRNR:PIRNR002854}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilv
metQ; D-methionine-binding lipoprotein MetQ precursor
scnpilot_p_inoc_scaffold_33_66
Flavobacterium rivuli, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

80019..80630
DNA (612bp) protein (204aa)
hypothetical protein n=1 Tax=Flavobacterium rivuli RepID=UPI00036ECBEC
Membrane protein {ECO:0000313|EMBL:KGO86822.1}; TaxID=1121895 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium rivuli WB
hypothetical protein
scnpilot_p_inoc_scaffold_33_67
Leadbetterella byssophila, Leadbetterella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

81189..81482
DNA (294bp) protein (98aa)
Thioredoxin n=1 Tax=Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15) RepID=E4RRP8_LEAB4
thioredoxin
Thioredoxin {ECO:0000313|EMBL:ADQ16704.1}; TaxID=649349 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Leadbetterella.;" source="Leadbetterella byssophila (strain DSM 17132
scnpilot_p_inoc_scaffold_33_68
Zhouia amylolytica, Zhouia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(81529..82197)
DNA (669bp) protein (223aa)
Transcriptional regulator, AraC family n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PSV5_CHIPD
Uncharacterized protein {ECO:0000313|EMBL:ETN96978.1}; TaxID=1286632 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Zhouia.;" source="Zhouia amylolytica AD3.;"
AraC family transcriptional regulator
scnpilot_p_inoc_scaffold_33_69
unknown

Not on your lists

82201..82422
DNA (222bp) protein (74aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_33_70
unknown

Not on your lists

comp(82359..83570)
DNA (1212bp) protein (404aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_33_71
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

83786..84784
DNA (999bp) protein (333aa)
glycosylasparaginase n=1 Tax=Niabella aurantiaca RepID=UPI00036E00E5
glycosylasparaginase
Glycosylasparaginase {ECO:0000313|EMBL:AHF14232.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;
scnpilot_p_inoc_scaffold_33_72
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

84812..85555
DNA (744bp) protein (248aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00035D7E48 rbh
copper homeostasis protein CutC
Copper homeostasis protein CutC {ECO:0000313|EMBL:AHF14233.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli
scnpilot_p_inoc_scaffold_33_73
unknown

Not on your lists

comp(85793..86185)
DNA (393bp) protein (131aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_33_74
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

86488..87213
DNA (726bp) protein (242aa)
Uroporphyrinogen III synthase HEM4 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PKZ5_CHIPD
Uroporphyrinogen-III synthase {ECO:0000313|EMBL:GAO41786.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihum
uroporphyrinogen III synthase HEM4
scnpilot_p_inoc_scaffold_33_75
unknown

Not on your lists

comp(87301..88419)
DNA (1119bp) protein (373aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_33_76
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

88601..89602
DNA (1002bp) protein (334aa)
Tryptophanyl-tRNA synthetase {ECO:0000313|EMBL:ACU64287.1}; EC=6.1.1.2 {ECO:0000313|EMBL:ACU64287.1};; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophaga
Tryptophanyl-tRNA synthetase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PQ49_CHIPD rbh
tryptophanyl-tRNA synthetase
scnpilot_p_inoc_scaffold_33_77
Marivirga tractuosa, Marivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

89687..91531
DNA (1845bp) protein (615aa)
hypothetical protein n=1 Tax=Nafulsella turpanensis RepID=UPI0003458727
von willebrand factor type a
von Willebrand factor type A {ECO:0000313|EMBL:ADR20981.1}; Flags: Precursor;; TaxID=643867 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Marivirga.;" source="Marivirga
scnpilot_p_inoc_scaffold_33_78
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

91535..92509
DNA (975bp) protein (325aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; C
Histidine kinase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PII3_CHIPD
histidine kinase
scnpilot_p_inoc_scaffold_33_79
Bacteroidales bacterium CF, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

92587..93069
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Bacteroidales bacterium CF RepID=U5Q8V8_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGY54898.1}; TaxID=1400053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales.;" source="Bacteroidales bacterium CF.;"
scnpilot_p_inoc_scaffold_33_80
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

93086..94459
DNA (1374bp) protein (458aa)
transporter n=1 Tax=Dyadobacter beijingensis RepID=UPI00037D43D6
outer membrane efflux protein
Outer membrane efflux protein {ECO:0000313|EMBL:ACT95365.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobact
scnpilot_p_inoc_scaffold_33_81
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

94554..95564
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Fibrella aestuarina BUZ 2 RepID=I0K1Z4_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCG98147.1}; TaxID=1166018 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrella.;" source="Fibrella aestuarina BUZ 2.;"
scnpilot_p_inoc_scaffold_33_82
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

95611..98769
DNA (3159bp) protein (1053aa)
Acriflavin resistance protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W040_DYAFD
acriflavin resistance protein
Acriflavin resistance protein {ECO:0000313|EMBL:ACT95367.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (stra
scnpilot_p_inoc_scaffold_33_83
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(98995..100500)
DNA (1506bp) protein (502aa)
Protoporphyrinogen oxidase-like protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7P9W4_CHIPD
protoporphyrinogen oxidase-like protein
Protoporphyrinogen oxidase-like protein {ECO:0000313|EMBL:ACU57540.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Ch
scnpilot_p_inoc_scaffold_33_84
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(100531..102105)
DNA (1575bp) protein (525aa)
UDP-galactopyranose mutase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PAU1_CHIPD rbh
hypothetical protein
UDP-galactopyranose mutase {ECO:0000313|EMBL:ACU57570.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pi
scnpilot_p_inoc_scaffold_33_85
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

102430..103695
DNA (1266bp) protein (422aa)
MiaB-like tRNA modifying enzyme n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PM77_CHIPD
MiaB-like tRNA modifying protein
MiaB-like tRNA modifying enzyme {ECO:0000313|EMBL:ACU63982.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinopha
scnpilot_p_inoc_scaffold_33_86
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

103783..105306
DNA (1524bp) protein (508aa)
GH3 auxin-responsive promoter n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PK26_CHIPD
GH3 auxin-responsive promoter
GH3 auxin-responsive promoter {ECO:0000313|EMBL:ACU58367.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga
scnpilot_p_inoc_scaffold_33_87
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

105366..106037
DNA (672bp) protein (224aa)
Beta-lactamase domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMS8_NIAKG
Beta-lactamase {ECO:0000313|EMBL:KIC94558.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisil
beta-lactamase
scnpilot_p_inoc_scaffold_33_88
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(106310..107584)
DNA (1275bp) protein (425aa)
Fibronectin, type III domain protein n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JV95_9BACT rbh
Fibronectin, type III domain protein {ECO:0000313|EMBL:ELR71172.1}; TaxID=1237149 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imteche
hypothetical protein
scnpilot_p_inoc_scaffold_33_89
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(107724..108971)
DNA (1248bp) protein (416aa)
Major facilitator superfamily MFS_1 n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0SD00_PEDSD rbh
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ADY51757.1}; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source=
scnpilot_p_inoc_scaffold_33_90
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


109142..111820
DNA (2679bp) protein (893aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897, ECO:0000256|SAAS:SAAS00075954};; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia;
DNA gyrase subunit A n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PUW6_CHIPD
DNA gyrase subunit A
Displaying items 61-90 of 303 in total

View Taxonomy