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scnpilot_p_inoc_scaffold_92_182

Organism: SCNpilot_P_inoc_Sphingobacteriales_44_17

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 ASCG 13 / 38
Location: 228506..230290

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S1 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PMB8_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 74.9
  • Coverage: 594.0
  • Bit_score: 923
  • Evalue 8.50e-266
RNA binding S1 domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 74.9
  • Coverage: 594.0
  • Bit_score: 923
  • Evalue 2.40e-266
RNA binding S1 domain protein {ECO:0000313|EMBL:ACU64023.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga similarity UNIPROT
DB: UniProtKB
  • Identity: 74.9
  • Coverage: 594.0
  • Bit_score: 923
  • Evalue 1.20e-265

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Taxonomy

Chitinophaga pinensis → Chitinophaga → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1785
TTGTCACAAAACTTAAACATCACAGCGCATGATGATTTCGACTGGAGTGTCGATAAGCGCAACGTAGCTTCTTATTCCCAGGACCAACGTGAGGCCTTGGAAAAATCGTACGAGGAGACTTTCAAGTCTATCAATGAAGCAGAATTATTAAAAGGTACGGTTGTTGGTCTGACCAAAACGGATGCCATCATCAACATCGGGTTCAAATCTGATGGTCTGATATCACTGAATGAATTCCGTGATATGCCGAACATCACGATCGGTGACGAAGTTGAAGTGCTTGTTCTGGAGAAGGAAGACCGTGACGGTCAGCTCTCTTTAAGCCGCAAGCAGGCCCGTCAGGTACGCAGCTGGCAGAACATTGTGGACTACTTCAAATCAGGAGAAGTGGTTACCGGTACGATCACGTCCAAAACCAAAGGCGGCCTTATCGTGGACGTTAACGGTCTTGAAACGTTCCTGCCCGGTTCCCAGATCGATGTTAAACCCGTTACGGACTACGATCAGTACGTGGGTAAAACTATGGATTTCAAGGTTGTTAAGATCAACGAGCAGATCCGTAATGCCGTGGTTTCTCACAAAGCCCTTATCGAAAGCGATTTAGAGCAGCAACGTGGTGAGATCATGTCTAAACTTGAAAAAGGACAAATCTTAGAAGGTACAATCAAAAACGTTACAGACTTCGGTGCATTCGTTGACCTGGGTGGCGTAGACGGTTTATTGTATATTACAGATATCAGCTGGGGTCGTGTATCTCATCCGAGCGAAGTATTAAGCAACGGTCAGACGCTGAACGTTGTGGTATTGGACTTTGATGATGATAAAAAACGTATCAGCTTAGGCCTGAAGCAACTGACGCCTCAGCCTTGGGAAAATTTACCGGAAGCTGTTGCGGAAGGTTCTACAGTAAAAGGTAAAGTAGTAAATATCGAAGATTACGGTGCTTTCCTGGAAATCTTACCTGGTGTTGAAGGCCTGGTGCACGTATCTGAAATTACCTGGAGCTCCCAGCCTATCAATGCAAAAGAGTTCTTCAAAATGGGTGATGAGTACGAAGCAAAAGTCGTTACCTTAGACAGGGAAGACAGGAAAATGTCCTTATCTATCAAACAACTGACTGATGATCCATGGGGAGATATCGAAAATAAATTCCCTGAAAACAGCAGGCATACCGGTGTAGTTAAGAATATCACTCCTTACGGCGTATTCGTTGAGCTGGAGACAGGTATCGGCGGTATGATCCACATCAGCGATCTTAGCTGGACCAAACGTTACAACAATCCTTCCGAGTTTACTAAAGTTGGTGAGAAGATAGACGTTGTTATTTTATCTATTGATAAAGAAAACCGCAAATTATCTCTGGGCCACAAGCAACTGGAAGAAGATCCATGGAACACTTTTGAAACCGTATTCCCTGTAGGTTCCGTTCACGAAGGTACCATCATCCGTAAAGATGATAAAGGTGCAGTAGTGCAACTGGCGCATGGCCTGGAAGCATTTGCTCCTACCCGCCACCTCCGTAAAGAAGATGAGACTTCTTTAAGCAACGAGGATACCGCTTCTTTCGTGGTTCTGGAGTTTGACCGTAACGAAAAGAAAATCCTTGTTTCTCACAGCCGTACTTGGGAACAGGCTAAAGCTGATGAAAGAGAAGCACAGGCAAAGGAAACAAAAGAATCAGTGAAAAAAGTACAGGATAAAGTTGAAAAACCAACCCTTGGTGACTTAGGTGCTTTAGCTGATATCAAGAACAAACTGAAAGAAGAAGAGGAAGGTAATAAATAA
PROTEIN sequence
Length: 595
LSQNLNITAHDDFDWSVDKRNVASYSQDQREALEKSYEETFKSINEAELLKGTVVGLTKTDAIINIGFKSDGLISLNEFRDMPNITIGDEVEVLVLEKEDRDGQLSLSRKQARQVRSWQNIVDYFKSGEVVTGTITSKTKGGLIVDVNGLETFLPGSQIDVKPVTDYDQYVGKTMDFKVVKINEQIRNAVVSHKALIESDLEQQRGEIMSKLEKGQILEGTIKNVTDFGAFVDLGGVDGLLYITDISWGRVSHPSEVLSNGQTLNVVVLDFDDDKKRISLGLKQLTPQPWENLPEAVAEGSTVKGKVVNIEDYGAFLEILPGVEGLVHVSEITWSSQPINAKEFFKMGDEYEAKVVTLDREDRKMSLSIKQLTDDPWGDIENKFPENSRHTGVVKNITPYGVFVELETGIGGMIHISDLSWTKRYNNPSEFTKVGEKIDVVILSIDKENRKLSLGHKQLEEDPWNTFETVFPVGSVHEGTIIRKDDKGAVVQLAHGLEAFAPTRHLRKEDETSLSNEDTASFVVLEFDRNEKKILVSHSRTWEQAKADEREAQAKETKESVKKVQDKVEKPTLGDLGALADIKNKLKEEEEGNK*