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scnpilot_p_inoc_scaffold_194_76

Organism: SCNpilot_P_inoc_Sphingobacteriales_44_17

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 ASCG 13 / 38
Location: comp(86369..86746)

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix domain protein n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2EWR5_EMTOG similarity UNIREF
DB: UNIREF100
  • Identity: 25.4
  • Coverage: 114.0
  • Bit_score: 77
  • Evalue 1.00e-11
helix-turn-helix domain protein similarity KEGG
DB: KEGG
  • Identity: 25.4
  • Coverage: 114.0
  • Bit_score: 77
  • Evalue 2.90e-12
Helix-turn-helix domain protein {ECO:0000313|EMBL:AFK04118.1}; TaxID=929562 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Emticicia.;" source="Emticicia oligotrophica (str similarity UNIPROT
DB: UniProtKB
  • Identity: 25.4
  • Coverage: 114.0
  • Bit_score: 77
  • Evalue 1.40e-11

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Taxonomy

Emticicia oligotrophica → Emticicia → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 378
TTGAGGGTTTTAAGGGAAGTCCATAATTATACACAGGAGTATGTGTCTAATGTCTTGGATGTAGCACCCAGCACGTATTCATTAATGGAGAAGGGACAAGCACAGATAACGATAGAAAGGATAGAGAAATTAGCAAGTTTATATAAAATGGATATAAGTGATTTATTGAAGTTAAGCGACCAGACTATTATACAACAGCATTTTACTTATTCAAATGGCATAAGCGAGAGCGTAACCATAAATAATAACGGTTTGGCAGAAGACGAACGAAAGATGTATAAGGAAGTGATAGAACGGTTAGAAAGGCAGAATAATAAGTTAGAAGAACAGAACGAAAGGTTATTACATCTCCTCGAGAAACTGTCAGAAACCAAATAA
PROTEIN sequence
Length: 126
LRVLREVHNYTQEYVSNVLDVAPSTYSLMEKGQAQITIERIEKLASLYKMDISDLLKLSDQTIIQQHFTYSNGISESVTINNNGLAEDERKMYKEVIERLERQNNKLEEQNERLLHLLEKLSETK*