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scnpilot_p_inoc_scaffold_315_24

Organism: SCNpilot_P_inoc_Sphingobacteriales_44_17

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 ASCG 13 / 38
Location: comp(30296..31495)

Top 3 Functional Annotations

Value Algorithm Source
Lipid A core--O-antigen ligase n=1 Tax=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) RepID=Q11XH7_CYTH3 similarity UNIREF
DB: UNIREF100
  • Identity: 28.2
  • Coverage: 400.0
  • Bit_score: 143
  • Evalue 3.70e-31
lipid A core--O-antigen ligase similarity KEGG
DB: KEGG
  • Identity: 28.2
  • Coverage: 400.0
  • Bit_score: 143
  • Evalue 1.00e-31
Lipid A core--O-antigen ligase {ECO:0000313|EMBL:ABG57889.1}; TaxID=269798 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Cytophaga.;" source="Cytophaga hutchinsonii (strai similarity UNIPROT
DB: UniProtKB
  • Identity: 28.2
  • Coverage: 400.0
  • Bit_score: 143
  • Evalue 5.20e-31

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Taxonomy

Cytophaga hutchinsonii → Cytophaga → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1200
ATGATCACAATACTGGGCTTTTTCGTATCGCGGGCATTTGTTTCCATCGGGAGCATCCTGCTGGTGGCGGCCGCTTTCTACCAGTTTGGCATCAGGGCGACCCTGAAGCGCTACTGGGCCGTGGCGTTCAACAGGATCGCCCTGCTGCTGCTGCTGGTATCGGCGGTGAGCGTCCTGTGGAGCGATAATATAAACGCCTGGCAGCAGGATACGGTCACCAAGCTCAGCTTCCTGGTGCTGCCGCTGGGGTTTGCAGTGGGCGGCCTTTCCAAGATGAAGGTGCTGAAGCGGGTGATATACGCCGTCAATATTTTCGCCTTTATCACGGTGGTCCATAGCCTTATAGTGTACCTGGGCGATGTGGAAAGCGGCCATGCGGCCTATATGCTGCATACTACCAGGTACGGCGACCATATAAGGTTTAGTTTCCTGCTCTCCCTGACGGTCATCTTTAACCTGTACCTGCTGTTTGAAAAGGGCCGGCTCCTTGTCCGGACGGAACAGGGAATGCTCCTGTTCCTGTCCGTGCTCTTCTTTGCCTATTTACACCTCTTAAGCGCCAGGACAGGCTTATTGTGCGCCTATACAGGCATAGGGACCTTGCTGCTGGTAAAGGCCTGGCAGCGGAAGCGCGTATGGGCGCTGGCCGTTGTTGCAGCGGGCCTGCTGGTGCCGGTGCTTGCGGTGCAGCTTTCCCCCCGCCTGGCGGATAAGGTGGTCTTCATGCAGCACGAGATAACCAGGGTCAAAGACCAGTCGGCTGCCGTACAATATAATTACAGTGATAACAACAGGATATTGTCTTATGAAGCTGCATGGGATAATATTAAGGAGCATTACTGGCTGGGAGTAGGCACAGGCGACCTGAGAGATAGAATGGCAGCTACCTACAGGGAAAAATTTCCTGCTATCCCGGAGGAAGGAATCTTAAGGGTGCCTCATATGCAGGTGCTTTCTTCGGCCATGGCCATCGGCATTCCGGCAGGGCTTATCTGCATCGTGGGTCTTATCATAGCCCCCCTGCTGCTTTCCTACAGGCACAGGCTGTATATCAGGATCAATATGCTGATGATGCTGCTGTACTTTATGGTAGATGCCCACCTGGAGATCCAGTTCGGCATACTGATATTTCTTTTCTTTACTTTATTGTGGATGATATCCGACGGTAATGAAGTGGAAGATACCGGCTCTAATGTGTAA
PROTEIN sequence
Length: 400
MITILGFFVSRAFVSIGSILLVAAAFYQFGIRATLKRYWAVAFNRIALLLLLVSAVSVLWSDNINAWQQDTVTKLSFLVLPLGFAVGGLSKMKVLKRVIYAVNIFAFITVVHSLIVYLGDVESGHAAYMLHTTRYGDHIRFSFLLSLTVIFNLYLLFEKGRLLVRTEQGMLLFLSVLFFAYLHLLSARTGLLCAYTGIGTLLLVKAWQRKRVWALAVVAAGLLVPVLAVQLSPRLADKVVFMQHEITRVKDQSAAVQYNYSDNNRILSYEAAWDNIKEHYWLGVGTGDLRDRMAATYREKFPAIPEEGILRVPHMQVLSSAMAIGIPAGLICIVGLIIAPLLLSYRHRLYIRINMLMMLLYFMVDAHLEIQFGILIFLFFTLLWMISDGNEVEDTGSNV*