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scnpilot_p_inoc_scaffold_21_38

Organism: SCNpilot_P_inoc_Paludibacter_47_17

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(50079..50852)

Top 3 Functional Annotations

Value Algorithm Source
sugar transporter n=1 Tax=Anaerophaga thermohalophila RepID=UPI000237BC9E similarity UNIREF
DB: UNIREF100
  • Identity: 42.0
  • Coverage: 262.0
  • Bit_score: 228
  • Evalue 9.70e-57
Polysaccharide export outer membrane protein {ECO:0000313|EMBL:GAO31088.1}; TaxID=1236989 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Geofilum.;" source="Geofilum similarity UNIPROT
DB: UniProtKB
  • Identity: 38.9
  • Coverage: 257.0
  • Bit_score: 206
  • Evalue 5.50e-50
periplasmic protein involved in polysaccharide export similarity KEGG
DB: KEGG
  • Identity: 37.9
  • Coverage: 264.0
  • Bit_score: 163
  • Evalue 6.30e-38

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Taxonomy

Geofilum rubicundum → Geofilum → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 774
ATGAAAAAAATCCTATTCATGGCCATCCTTATTGCGATGGCTTCCTGTATTCCGCAGAAAAAGCTTATTTATATGCAGGATAAGAGTGCGGAGAAAGAGTACAGTAACCCGTACCAAAAGGCGGAGCAGATTACTGAACTGTACAAAGTGCAAGCGGGTGATTACTTGTACATAAAAGTAAATTCGACCCGGGAGGAAATTGATAAATTGTATAATTTAGGTAGCAATCAGCAACTTACTCAATTAGGAAATGCAACCAGTGCAAAGTACTTTTCTTACCTTGTAAAGGACAATGGAACCATTGATTTTCCGTATTTAGGGGAAGTGGAGGTTGCCGGAAAAACTACTACTGAGATCAGACATGAGATTCAGGCAAAGCTGAGTCGCTCCATGGATTCATTTAGTGTTCAGGTAGTATTAACCAATGCCAGTTTCTCGGTATTGGGTGAGGTACGCAAACCCGGTCAATATCCCATGAGTCGTGACCAAATCACTCTGTTTGAGGCTATTTCGATGGCGGGTGATATCACCGGTTTCGGTAAACGAAACCAGATTCGCATTGTACGTCCTACTCCCGGAGGTTCTACCACCATCAATGTCGATCTGACCGATAAAAATGTGATCGACAGCCAACGTTATTTTATTTATCCCAACGACCTCATTTATGTTGAACCCATGGCCATCAAGCAATACGGTATAGGCGAAACCTTTTCGTTCAGCATGATTTCCTGGCTCATCAGTATCGGCCTCTTCATTAACACCCTCAACAAGTAA
PROTEIN sequence
Length: 258
MKKILFMAILIAMASCIPQKKLIYMQDKSAEKEYSNPYQKAEQITELYKVQAGDYLYIKVNSTREEIDKLYNLGSNQQLTQLGNATSAKYFSYLVKDNGTIDFPYLGEVEVAGKTTTEIRHEIQAKLSRSMDSFSVQVVLTNASFSVLGEVRKPGQYPMSRDQITLFEAISMAGDITGFGKRNQIRIVRPTPGGSTTINVDLTDKNVIDSQRYFIYPNDLIYVEPMAIKQYGIGETFSFSMISWLISIGLFINTLNK*