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scnpilot_p_inoc_scaffold_34_25

Organism: SCNpilot_P_inoc_Niastella_45_30

near complete RP 53 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 13 / 38
Location: 38548..40341

Top 3 Functional Annotations

Value Algorithm Source
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP similarity UNIPROT
DB: UniProtKB
  • Identity: 91.3
  • Coverage: 597.0
  • Bit_score: 1090
  • Evalue 0.0
Elongation factor 4 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPR0_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 91.3
  • Coverage: 597.0
  • Bit_score: 1090
  • Evalue 0.0
  • rbh
GTP-binding protein lepA similarity KEGG
DB: KEGG
  • Identity: 91.3
  • Coverage: 597.0
  • Bit_score: 1090
  • Evalue 0.0

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Taxonomy

Niastella koreensis → Niastella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1794
ATGAAGAATATCCGCAATTTTTGCATTATTGCCCATATTGACCATGGTAAATCGACCCTGGCCGACCGCCTGCTGCAGTCTACCAATACCATCAGCGACCGCGATATGATGGACCAGGTACTGGATGATATGGACCTGGAGCGCGAAAAAGGTATCACCATCAAGAGCCACGCCATCCAGATCAACTACAAGCATACCGATGGACAGGAGTATGTGCTCAACCTGATCGATACACCCGGCCACGTAGACTTCAGCTACGAAGTAAGCCGTGCCCTGGCAGCCTGCGAAGGCGCCCTGCTGCTGGTAGATGCTACTCAGGGTATACAGGCACAAACCATCAGCAACCTGTACCTGGCTATCGACAACGATCTCGAGATCATCCCCGTGGTCAACAAGATCGATATGGATGGCGCTATGATCGAGGAAGTGAAAGACCAGATCATCGACCTCATTGGCTGCAAACCCGAAGATATCCTGCTGGCCAGTGGCCGTACCGGTATCGGTATTGAAGGTATTCTGAATGCCATCGTAGAGCGTATTCCTGCACCACAGGGCGATGAAAAAGCACCCCTGCAGGCGCTCATCTTCGATAGTGTATTCAACAGCTTCCGCGGTATCATTGTATACTATCGTATTCTCAATGGAACCATACGCAAAAATGATCTGGTAAAATTCATCAGCACCGGCAAGGAGTACGAAGCGGCCGAAGTGGGCATCCTGAAACTAAAGATGTCGGAGCGTGCCGAAGTGAAGGCTGGTGATGTAGGTTATATTATTACCGGTATCAAAAATGCCAAAGAAGTAAAAGTGGGTGATACCATCACTCTCGCAGCCAATCCTTCGCCCGAAGCCATCCAGGGTTTCGAGGAAGTAAAGCCCATGGTATTTGCCGGTATTTATCCGGTTAACACCGATGAGTTTGAAGAGCTGCGCGACTGTATGGATAAGCTGCAGTTGAATGACGCTTCACTCACCTTTGAACTGGAAACATCGCAGGCCCTGGGCTTCGGTTTCCGATGCGGATTCCTGGGTATGCTGCACATGGAAATCATCCAGGAGCGGCTGGAGCGCGAGTTTGACCAGACGGTGATCACTACGGTACCCAACGTAAGTTTTATTGCTTACCTGACCAATGGTGAAACCAAAATCGTCAACAATCCCACCGAGTTTCCTGACCCGGTAAAGACCGAGCGGATCGAAGAGCCTTATATCCGAGCACAAATCATTACCAAACCCGATTATATCGGCAATATCATGACCCTTTGCCTGGGCAAACGTGGCATCCTGCTCAACCAGAGCTATCTTACCACTACAAGGGTAGAGCTGATATTTGAAATGCCACTGACCGAGATCGTATTCGACTTTTATGATAAGCTGAAATCGCAGACACGCGGATATGCATCCTTCGATTATCATCCGATCGGCTACCGCGACAGTGATATTGCGAAAATGGATATCCTGCTCAATGGTGACAAAGTTGATGCCCTGAGTGCATTGATTCACCGCAGCCGGGCACAGGATTTTGGTCGTAAGCTCTGCGAAAAACTGAAAGAACTGCTGCCGCGTCAGCAATTCCAGATCGCCATCCAGGCGGCTATCGGCGCCAAGGTTATTGCCCGCGAAAATATCTCTGCCATGCGTAAGGATGTAACCGCTAAATGTTATGGTGGCGACATCAGCCGTAAACGTAAACTGCTCGAGAAGCAGAAAGAAGGTAAGAAACGAATGCGCCAGATCGGTAACGTAGAAGTGCCGCAGGAAGCGTTTCTCGCTGTGCTGAAGCTCGACGATTAG
PROTEIN sequence
Length: 598
MKNIRNFCIIAHIDHGKSTLADRLLQSTNTISDRDMMDQVLDDMDLEREKGITIKSHAIQINYKHTDGQEYVLNLIDTPGHVDFSYEVSRALAACEGALLLVDATQGIQAQTISNLYLAIDNDLEIIPVVNKIDMDGAMIEEVKDQIIDLIGCKPEDILLASGRTGIGIEGILNAIVERIPAPQGDEKAPLQALIFDSVFNSFRGIIVYYRILNGTIRKNDLVKFISTGKEYEAAEVGILKLKMSERAEVKAGDVGYIITGIKNAKEVKVGDTITLAANPSPEAIQGFEEVKPMVFAGIYPVNTDEFEELRDCMDKLQLNDASLTFELETSQALGFGFRCGFLGMLHMEIIQERLEREFDQTVITTVPNVSFIAYLTNGETKIVNNPTEFPDPVKTERIEEPYIRAQIITKPDYIGNIMTLCLGKRGILLNQSYLTTTRVELIFEMPLTEIVFDFYDKLKSQTRGYASFDYHPIGYRDSDIAKMDILLNGDKVDALSALIHRSRAQDFGRKLCEKLKELLPRQQFQIAIQAAIGAKVIARENISAMRKDVTAKCYGGDISRKRKLLEKQKEGKKRMRQIGNVEVPQEAFLAVLKLDD*